LOC120567398


Basic Information

Item Value
gene id LOC120567398
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19365820 ~ 19373983 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814360.1
GACAGTACAAACTCACACACCGTCCTATACATCTGTGACACACAcccatccacacacactcacactcacagaaCTCGACTGTAACACAAAAGGAAATTACTTTGCAGacatgttattgttattatacgTGACTACTGTTTCCTGCGTCTTGTTTGGTGGTTCATCTGCTGAATTTTTTGAAAAACGTATGTGCTATGGCAGAACTTTGAGATTGCCATTTAGTTTTACCCCACCTCTTTTCAATGGACAGTTGTACTTCACTCCGAAGAATGGTGGATCCAGGAAGCTAGTGATGGATAAGGACGAGGCAAAGGAGTCACGCCTAAAAATTTCCATTGGCTCAGTTGAACTCACAGATTTGACAGAAAGAGATGAGGGAACGTTTTCTGTCTCAGTTGATGATGCTATGCCATACGATGTGATCAAACTGCAAATTGTGGAGTGTGCTTACAGGATGTACAGGAATTACGGGAAATCATATTCCTATACTGTTCCTAGACAGACTGAATTCGTGGATTTCACTCCCCTTCACGGTGAGGACCTACCGAGGGTCCTGTGGAATCGCACCGACCCTCAGGACAATAAGGGAAGCAGATGGCAGATGAAGGGTTTTATCTGGGAGATTAAGAACGTCAATCAGGCAGATAGCGGCTACTAcaacttcagaaaaaaagacaacactttgcTGTCTAGGATACGGCTCACAGTGAAAGagaacaatagACACTATAATACGAATGTGAATGAACGGCTCCTCATCCAAAATCCTACGTTCGTTGCCACATGGACTGTGACTTTTACACCAGCAGGGGAAGTGGAAAACAACACATTGATGGAAGCAGGCAATTTGGTCACAGATGATAGCAGGATTCGGATCGTGCCTAAGGGCATAGAGATTGATCCTGTAAATATCATAGACTCTGGCACCTTTGAGTTCAGAGACCAGCAAGGCTACCTGGCCCAGATTGTGATAGTGGAGGTAGAACTAGAACCTCTTCCTCTTGTCCTTCATCCATATGTTTATGTTGCTATTACTGGCGGGATTATCTTTGCGGTGGTTGTCTGCTGTTGCTGTGTGAAAAAGTGCTGTTGTAAAAACAGCTCTTCCAAAAGCCATGAGTCTGCTCCTGAGACTGCAGCAGCACCTGCTGTGTATTACCATGATTTGATTGAACCTGCAGGCCCAAGTTACTCTGTTGCACCTGGAGAACATACAACTACCTCCCTTGAGCCATCGGTTGAACCTCTAGGAGGGCAAGAAGGCGATCCAGCTCCTACATTCGGCTCTGATTGTCGCTCCTCAGACCCTGTGCCAAAGTTTGAGCTCAAAAGACAGCCCATTCCCTCTGCAGTCCCCCTCGTTTCAGACTCAATTTTCTGTGATGTTTACACCTCAGATAAACTTAACTTTCTGTAAGGAGCACACCGTACATTCAGAGATGCAGAGTTGAATTTAGCATTGTGCATTGTGACTAGCGGAAATAGAGCCATTTAAGTGGTGTACAGAAAAAGGACCATGTATTCCTGTTTAATATGGAATATAAATGTGTTTCATAAACTCAGGTTATAATTAAAATGCATAACTTACACCGTATGCTGCTGCCAAGGATATTGAAGAAAGGGGAGATGATGTTACAATGAGGACTGAAAGTGAGTCTGGGTAGCAGATTTTGCAAATTGAGGATGTCAAACTGACTTCAATACTAATGTGGATCAAAACGCGACACTCAGCAATTTAAACCACTGTCACCAGGTTTACTTTTAAACCCTTGTCATGTTCCTTCAGCCTCATATATAGCAACGTGTTTGTGTGGCTTTGATCATTACATTCTGGGAAATTATATATGatattatttttgtctttatgCTTTGTATAAATAGTCCTACACAAGgaaatgtaattttttgagaaaaaaactatTCAATTTCTGTGGGACTGGGATCGCACTCAGAAGTGTAAAGAATTTTATAAGTCAGCAAATATATAtgttcatttttgta
>XM_039814361.1
GACAGTACAAACTCACACACCGTCCTATACATCTGTGACACACAcccatccacacacactcacactcacagaaCTCGACTGTAACACAAAAGGAAATTACTTTGCAGacatgttattgttattatacgTGACTACTGTTTCCTGCGTCTTGTTTGGTGTTGTACTTCACTCCGAAGAATGGTGGATCCAGGAAGCTAGTGATGGATAAGGACGAGGCAAAGGAGTCACGCCTAAAAATTTCCATTGGCTCAGTTGAACTCACAGATTTGACAGAAAGAGATGAGGGAACGTTTTCTGTCTCAGTTGATGATGCTATGCCATACGATGTGATCAAACTGCAAATTGTGGAGTGTGCTTACAGGATGTACAGGAATTACGGGAAATCATATTCCTATACTGTTCCTAGACAGACTGAATTCGTGGATTTCACTCCCCTTCACGGTGAGGACCTACCGAGGGTCCTGTGGAATCGCACCGACCCTCAGGACAATAAGGGAAGCAGATGGCAGATGAAGGGTTTTATCTGGGAGATTAAGAACGTCAATCAGGCAGATAGCGGCTACTAcaacttcagaaaaaaagacaacactttgcTGTCTAGGATACGGCTCACAGTGAAAGagaacaatagACACTATAATACGAATGTGAATGAACGGCTCCTCATCCAAAATCCTACGTTCGTTGCCACATGGACTGTGACTTTTACACCAGCAGGGGAAGTGGAAAACAACACATTGATGGAAGCAGGCAATTTGGTCACAGATGATAGCAGGATTCGGATCGTGCCTAAGGGCATAGAGATTGATCCTGTAAATATCATAGACTCTGGCACCTTTGAGTTCAGAGACCAGCAAGGCTACCTGGCCCAGATTGTGATAGTGGAGGTAGAACTAGAACCTCTTCCTCTTGTCCTTCATCCATATGTTTATGTTGCTATTACTGGCGGGATTATCTTTGCGGTGGTTGTCTGCTGTTGCTGTGTGAAAAAGTGCTGTTGTAAAAACAGCTCTTCCAAAAGCCATGAGTCTGCTCCTGAGACTGCAGCAGCACCTGCTGTGTATTACCATGATTTGATTGAACCTGCAGGCCCAAGTTACTCTGTTGCACCTGGAGAACATACAACTACCTCCCTTGAGCCATCGGTTGAACCTCTAGGAGGGCAAGAAGGCGATCCAGCTCCTACATTCGGCTCTGATTGTCGCTCCTCAGACCCTGTGCCAAAGTTTGAGCTCAAAAGACAGCCCATTCCCTCTGCAGTCCCCCTCGTTTCAGACTCAATTTTCTGTGATGTTTACACCTCAGATAAACTTAACTTTCTGTAAGGAGCACACCGTACATTCAGAGATGCAGAGTTGAATTTAGCATTGTGCATTGTGACTAGCGGAAATAGAGCCATTTAAGTGGTGTACAGAAAAAGGACCATGTATTCCTGTTTAATATGGAATATAAATGTGTTTCATAAACTCAGGTTATAATTAAAATGCATAACTTACACCGTATGCTGCTGCCAAGGATATTGAAGAAAGGGGAGATGATGTTACAATGAGGACTGAAAGTGAGTCTGGGTAGCAGATTTTGCAAATTGAGGATGTCAAACTGACTTCAATACTAATGTGGATCAAAACGCGACACTCAGCAATTTAAACCACTGTCACCAGGTTTACTTTTAAACCCTTGTCATGTTCCTTCAGCCTCATATATAGCAACGTGTTTGTGTGGCTTTGATCATTACATTCTGGGAAATTATATATGatattatttttgtctttatgCTTTGTATAAATAGTCCTACACAAGgaaatgtaattttttgagaaaaaaactatTCAATTTCTGTGGGACTGGGATCGCACTCAGAAGTGTAAAGAATTTTATAAGTCAGCAAATATATAtgttcatttttgta

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814360.1 True 2001 mRNA 0.42 9 19365820 19373983
XM_039814361.1 False 1909 mRNA 0.42 9 19365820 19373983

Neighbor

gene id symbol gene type direction distance location
aldob aldob coding downstream 31122 19331706 ~ 19334698 (-)
arsia arsi,LOC104927051 coding downstream 60755 19301805 ~ 19305065 (-)
LOC120566716 LOC102215832 coding downstream 83146 19277131 ~ 19282674 (-)
pdgfrb pdgfrb coding downstream 162719 19176247 ~ 19203101 (-)
LOC120567146 csf1r coding downstream 190079 19161748 ~ 19175741 (-)
LOC120567397 NA coding upstream 2221 19376204 ~ 19384972 (-)
si:ch211-203d1.3 ssh3 coding upstream 40685 19414668 ~ 19426862 (-)
LOC120566441 LOC100707887 coding upstream 58333 19432316 ~ 19435195 (-)
slc25a51b slc25a51 coding upstream 90488 19464471 ~ 19469408 (-)
LOC120566455 LOC100699740 coding upstream 154439 19528422 ~ 19569097 (-)
G106248 NA non-coding downstream 44514 19320263 ~ 19321306 (-)
G106243 NA non-coding downstream 51404 19312809 ~ 19314416 (-)
LOC120566721 LOC102291516,LOC101487913,LOC102195901 non-coding downstream 77351 19287076 ~ 19288469 (-)
LOC120566720 NA non-coding downstream 100344 19262913 ~ 19265476 (-)
LOC120566722 NA non-coding downstream 102948 19262030 ~ 19262872 (-)
G106276 NA non-coding upstream 20827 19394810 ~ 19395994 (-)
G106303 NA non-coding upstream 103185 19477168 ~ 19557572 (-)
G106349 NA non-coding upstream 483113 19857096 ~ 19857367 (-)
G106378 LOC108242387 non-coding upstream 571672 19945655 ~ 20052690 (-)
G106367 NA non-coding upstream 587971 19961954 ~ 20007579 (-)
LOC120566717 LOC102215832 other downstream 115384 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 320869 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 674410 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 1051405 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 1297328 18067425 ~ 18068492 (-)
tomm5 NA other upstream 61856 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 103947 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 597850 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 856925 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1701774 21075757 ~ 21110067 (-)

Expression


Co-expression Network