LOC120567407 (LOC102775661,LOC102289345,LOC102208181)


Basic Information

Item Value
gene id LOC120567407
gene name LOC102775661,LOC102289345,LOC102208181
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 2200363 ~ 2204158 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814365.1
GCTATAAGATCCCCAAACTCATCTGGTTTCTCAGAGCCTCCAGTCAGTTTTCTccaaacactcacacatacagactcacacacatacatacacacatacagacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacacacacacacacacacacacacacaaacacagaggcgTGATATGGTCCGGGGTACTTAACAGTGCAGATTTCTCTTGGAGGGGTCGAGAAGCAATTGTCACGACTTGGACTTTAGCCAAAAGAGGCACTGAAAACGGCTATACTTCTCGGACTGGACGCCCAATCACTCACAgCTGACCTCAGAAAACTAAAAGGAGGGAAGTGGAATTGTGTGACGCAAGGGTACATCCTGTTCCATGATGGGGATCCCGAATGACCTCTCCCTTTtcaactccacctcctccccaTATTCAACGACAGAGATCTATCTGAACACCTCTCTAGCCTCCTCTGCTCCCCCCTGCACAGACTGGCCTCCTGTCCCCATGACCACAGTCATCCCGGTCATCTACAGCATCATCTGCGTGCTGGGAACCGTAGCCAACGCCCTGGCAGTGTGGGTGTTGGCGCATGCCAGTGCCTTAAGGAGAACTGTAGCTAACACTTTCATGctgaacctgtgtgtgtctgacctgcTGTTCCTGCTGTCTCTCCCGCTGTGGGCCGTCTACTACTCCCAGGGCTACAGCTGGCCCTTTGGCCTGGTTGCCTGCAAAGTCTGCGGCGCTCTCCACAACCTCAACCTCTACGCGTCTATCTTCTTCATCACATGCATGAGCGTGGACCGTTACCTGGCCATCGTGCGTCCACTCCGCTCCCAGAGTGCACGATACCCCAAACGGGCCCGGCTCACGTGCATCCTGGTGTGGGTGCTGGCGTGCGCTTGCTCGGCCCCCACTTTGTATCTGAGGGACACTTACCCCCTGAAGGGGCTGGGCGTGGTGGCCTGCGTGATTGACTACCCTGATCATACCTGGTATCTGACCCTGGTCTGGATGAAGATTGCTCTGGCCTTCCTGCTGCCGATGTTTGTCATCTCTTGTTGTTACTGGGCTATTGGTAGACATTTGTTGGCGGACACAGGGCTGGTAAGAATGCAGAATCCGTCGCAACGCACCAACATGACCTCCTTTAAATCACTGGAGCTAAAGGAAGGCTGCAGTAAACCAGAGAGACCACCGACCCCTTGTGTGTGCCCCAGCTCCAGCGGGAGCAGACCCCTGGAGCGGGTGTTGTGGACAGTAGCTGCTGTGGTCGTGGCCTTCTTCGTCTGCTGGTTCCCCTTTCACTGCGTGACTTTCTTGGACGCGCTGAAGAGCGACGGCTGGCGGGACAGCTGCAGGATGTACTGGACCATCCACACCCTCACCCCTCTGACCCTTTGCTTGGGCTTCTCCAACTCAGCCATCAACCCCGTGCTCTACTGCTTCGTCGGAAACCATTTCCGGGGCCGTCTCGGGGGGCTCTGCAAGGGCCTGTGTGCTTGTCTTGAGGCCCGTGGGGGAGATCACAGTCAGAACAGGGGCTCCTTCAGCACCAGGCTGAGCTCCTTCTCTCGAAAACTCAGTGACCTGAAGGACCTGGCGATTGTGGAGCCCTCTGGTCCTGCCTTACCAGCCCTTCAGAGGGGAGGCTTTTCCTTCCCTCCACTGGCTTCACAGCCCAACGAGTGATGCCAACGTCAAGTGCCTGCTGAACTCCAATAAGCATggatgtgtgtgagacagagctGTTACTAAAACTGACTAAGTCTATTTCCAGCAGAGCTCAATGCTGCCCTACaaagaaaaattaacaaaagaaaacatgaagCTGAGGGAAAAAAGGGTTTAAAGTTTTGAGGCTGGATAGCCAAACTGTGTGACAAACAACTTTATACATTTCATGTCTTTAATGCTGCAGCAGGCAGCTCATTACAGCGAAAAAGCTCCAAGAATCCACTGTACGGAcacagttagcgactagctagtgatcatagtggagcatttagcagctaaagagccagatatttccctcaggagttgtaGGAGAGCAAACACAGAGCTGGGGGAAGATTGGACACGCATTCATCAGGTagccagaaacatgactccatATGAAATAGAATGTTGCTCCATGACTTCGAATAGGGAAAATATTTTAACTAATAAATATCACTATGCAACCTCCCCAggtgattacttacattaagacaatcATGTTTGGTATTACACGTTGTTTTGAAATTGCATGTTTAAATATGTGAATGATGCATTATCCTAAtaaatatgtgctaatttgcatagCTACATTTCCAAACAGAAACATTGGATAAAGCCAGGTTaatatttttgtttcatttggTTGACATAGGCCTATTAGagccaaatgtttttttgtgaatttaGGAGGAATCTATTGAAGCGAGTAGAAAAAGGGTAACGGTAGTCAccttaatgtgtattttgaaTGTTTGTTTCCCACTTGTcaaaaagaagacatgttatcgAAGCAAATTAGCctcccaaaaataaaaaaataataataatgtttttgcCTGTAGTGTCTCCCCTTCAAAGGCAATGCTATGTCAGTTTGGTGTTTACAAAGTTCCCTCATGTGGCTAAAAAAGAATCATATACAGTAGGTTTAGGTGTGCAGGAAAGAACCTGTAGGCAGTTACAGCTAATCTGGCTAACCTAGGCTAGTATTATTTCAGCAGGACTCGTTTAGCTGctgtttctttctgttttttcatCATGGTCGGATTTTCTGCCTCATTTTTATGGAATGATAAActtgtttaaaaagatgttGGATGTTCATAATAGAGTTTTCACAGGAAAACAGGTTTAATAGAGTACATTTAGCGATACCTAGGCTAGCTGTGGCTATCTTACAGCTAGCTTTGATTTAAGCTGTTTTGTAGTTTTGCAAACTGTGATGTTTCTTCTGAAATTATACTAATTGCAAAATAATACTGTAATTGTATTGGTTAAACAATTTTATATGGTAACTCTATGTCTACCGAATGTGTAATGACTTGGCTTTGTAGATATATTATATGTAATCATGTAACTTTGTTTTATGGTATTATTCTGTAAAGAAAGTTTAGGAAAATGACTGCATTTCTTTGACTGAATAAGAAATAAAGTGAACAATATTTCCCTAAAAA

Function

NR:

description
PREDICTED: type-2 angiotensin II receptor-like

GO:

id name namespace
GO:0038166 angiotensin-activated signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004945 angiotensin type II receptor activity molecular_function

KEGG:

id description
K04167 AGTR2; angiotensin II receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814365.1 True 3207 mRNA 0.46 2 2200363 2204158

Neighbor

gene id symbol gene type direction distance location
arhgef9a arhgef9,LOC102797990 coding downstream 338251 1799404 ~ 1862112 (-)
LOC120567293 NA coding downstream 405241 1791628 ~ 1795122 (-)
LOC120566745 LOC102312462,LOC100702004,LOC101465591,LOC103361369 coding downstream 416712 1768538 ~ 1783651 (-)
LOC120566744 NA coding downstream 432955 1749773 ~ 1767408 (-)
nxt2 nxt2 coding downstream 623655 1574392 ~ 1576708 (-)
apool NA coding upstream 6102 2210260 ~ 2219328 (-)
si:ch211-26b3.4 LOC102207626,LOC101486356,LOC102776433,LOC103359564,LOC102290361 coding upstream 17344 2221502 ~ 2298122 (-)
LOC120566307 pou3f4,LOC102778357 coding upstream 149401 2353559 ~ 2355799 (-)
LOC120567491 LOC104946186,LOC103359559,LOC102079772 coding upstream 196114 2400272 ~ 2405790 (-)
LOC120567490 LOC103359558,LOC102292217 coding upstream 201962 2406120 ~ 2419903 (-)
LOC120567184 NA non-coding downstream 263176 1936573 ~ 1937187 (-)
G102638 NA non-coding downstream 538164 1634594 ~ 1662199 (-)
G102621 LOC104967683 non-coding downstream 598828 1593835 ~ 1601535 (-)
G102609 NA non-coding downstream 643927 1555856 ~ 1556436 (-)
G102607 NA non-coding downstream 646821 1553327 ~ 1553542 (-)
G102741 NA non-coding upstream 15418 2219576 ~ 2221446 (-)
G102748 NA non-coding upstream 94630 2298788 ~ 2299221 (-)
G102749 NA non-coding upstream 95515 2299673 ~ 2300414 (-)
G102754 NA non-coding upstream 104308 2308466 ~ 2310822 (-)
LOC120566871 NA non-coding upstream 137039 2341197 ~ 2341905 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 2445 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 1358745 838946 ~ 841618 (-)
tmsb2 NA other downstream 1731913 466290 ~ 468450 (-)
G102276 NA other downstream 1968919 220592 ~ 231444 (-)
slc7a2 slc7a2,LOC102301583 other upstream 521302 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 686812 2890970 ~ 2898545 (-)
LOC120567496 NA other upstream 692013 2896171 ~ 2896313 (-)
guf1 guf1,LOC102797887 other upstream 1420001 3624159 ~ 3642640 (-)
G103268 NA other upstream 1698833 3902991 ~ 3925309 (-)

Expression


Co-expression Network