si:dkey-27i16.2 (LOC103370713,LOC104948504,LOC103391155,LOC108242049,LOC101171753)


Basic Information

Item Value
gene id si:dkey-27i16.2
gene name LOC103370713,LOC104948504,LOC103391155,LOC108242049,LOC101171753
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16938340 ~ 16942236 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814454.1
gtgtgtgtgtgtgtgggtagggCTTTATAATAAACTTACAGTTCCTGCTTGTCAGCGTTAAACCGTTCTGAACCCAGACGCACAGCAGCAGCCCGGTGGTGTTTTTAATTTCACTGCTCCAGCATGACCTCAGCCGTTACCGCAGACTTAGAGCTGGGCGAGTTGCTGCAGGAGTTCCAGGATgtggtggaggagctgaaggCCCCTTCTCAAAGCAAACCTCACGCTTACCAGCACGTCCTGCAGCAGGCCAAAAGTCGCACAGGGCTGGGCGACGACAGCGGAGTCGAGGACTCTGATTACAgcaGTGAAGCTTCTTTGGGAAACAGTTTGAACACCAGCGAGGAGGAGCTTCACACAGCAGGCATAACGCTGGCACCGAAAGCCAAGCTGGGAGACACGAGGGAACTTGAGAGTTTTATCGACATGTTGGACCGGGAACTAGCAGAGATGTGAACAGAGAGTAAGCGAGCCACGCagagggggggcggggggaaaCAGGCCAGGGGCAACATGGCTGGCTACTGCCGAGCAGACAGGCAGATCTACACCAGAGCAGATCTGAGGGAGCAAAAGCTCCCCTGGCTGCTCCAGGGGAAAAGGTTAACATCAGAAATTAAAAGGGCACTGCATTCCAAAATGCAAGAACACCGTCAGACCCCTGGCGACGCCGCGTCCAGCCGGCAAGATGACGTCCCTCAAGCATCCGAGATGTGTGACATATTCCTGAAACTAGACAAAGCTTCCATCTGTCCGGGGCATACGAGAAAACGCTGCCCAGAGTAAACAAAGCATGTTCGTGCCACATTTAAAATCCCCATAAGTACTatgccagtaaaaaaaaaatatatatatatatatttttttttttaaaggtggcTGTTAGAAATTACAGATGGCACTTTAGTTTCAAACTAATTTAAAGTCCAAGGGGTTCAGATCTGCTGTGTAATATCAAAAGTTCAATCATAGTTTATGTGCTGACATTTCCAGTGTACAGTTCTTGTtaatattatgttttatatatatatatatataaattgttGTACAGATGAATACACATCTAAATAAAGCTACATTTTGATTGAATTCCGTa
>XM_039814455.1
gtgtgtgtgtgtgtgggtagggCTTTATAATAAACTTACAGTTCCTGCTTGTCAGCGTTAAACCGTTCTGAACCCAGACGCACAGCAGCAGCCCGGTGGTGTTTTTAATTTCACTGCTCCAGCATGACCTCAGCCGTTACCGCAGACTTAGAGCTGGGCGAGTTGCTGCAGGAGTTCCAGGATgtggtggaggagctgaaggCCCCTTCTCAAAGCAAACCTCACGCTTACCAGCACGTCCTGCAGCAGGCCAAAAGTCGCACAGGGCTGGGCGACGACAGCGGAGTCGAGGACTCTGATTACACCAAGCTGGGAGACACGAGGGAACTTGAGAGTTTTATCGACATGTTGGACCGGGAACTAGCAGAGATGTGAACAGAGAGTAAGCGAGCCACGCagagggggggcggggggaaaCAGGCCAGGGGCAACATGGCTGGCTACTGCCGAGCAGACAGGCAGATCTACACCAGAGCAGATCTGAGGGAGCAAAAGCTCCCCTGGCTGCTCCAGGGGAAAAGGTTAACATCAGAAATTAAAAGGGCACTGCATTCCAAAATGCAAGAACACCGTCAGACCCCTGGCGACGCCGCGTCCAGCCGGCAAGATGACGTCCCTCAAGCATCCGAGATGTGTGACATATTCCTGAAACTAGACAAAGCTTCCATCTGTCCGGGGCATACGAGAAAACGCTGCCCAGAGTAAACAAAGCATGTTCGTGCCACATTTAAAATCCCCATAAGTACTatgccagtaaaaaaaaaatatatatatatatatttttttttttaaaggtggcTGTTAGAAATTACAGATGGCACTTTAGTTTCAAACTAATTTAAAGTCCAAGGGGTTCAGATCTGCTGTGTAATATCAAAAGTTCAATCATAGTTTATGTGCTGACATTTCCAGTGTACAGTTCTTGTtaatattatgttttatatatatatatatataaattgttGTACAGATGAATACACATCTAAATAAAGCTACATTTTGATTGAATTCCGTa

Function

NR:

description
regulator of cell cycle RGCC-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814454.1 True 1096 mRNA 0.47 5 16938340 16942236
XM_039814455.1 False 1015 mRNA 0.47 4 16938340 16942236

Neighbor

gene id symbol gene type direction distance location
eda NA coding downstream 388367 16537733 ~ 16549973 (-)
LOC120567144 LOC104923178 coding downstream 400893 16533282 ~ 16537447 (-)
LOC120567142 LOC104959287 coding downstream 405160 16530270 ~ 16533180 (-)
LOC120567296 NA coding downstream 411389 16518154 ~ 16526951 (-)
gjb1b LOC107093452,LOC101485490,LOC102291952 coding downstream 420280 16513561 ~ 16518060 (-)
znf185 NA coding upstream 28936 16971172 ~ 16988999 (-)
nsdhl nsdhl coding upstream 47581 16989817 ~ 16995549 (-)
gcna NA coding upstream 59174 17001410 ~ 17007394 (-)
ogt.1 ogt coding upstream 65892 17008128 ~ 17024727 (-)
kctd12b LOC107396469,LOC101170105,LOC102309695,LOC106928388 coding upstream 156296 17098532 ~ 17113581 (-)
G105443 NA non-coding downstream 182782 16755336 ~ 16755558 (-)
G105436 NA non-coding downstream 249035 16689083 ~ 16689305 (-)
G105435 NA non-coding downstream 249750 16688056 ~ 16688590 (-)
G105433 NA non-coding downstream 250611 16687479 ~ 16687729 (-)
G105417 NA non-coding downstream 432062 16466448 ~ 16506278 (-)
G105549 NA non-coding upstream 110269 17052505 ~ 17055622 (-)
G105577 NA non-coding upstream 175515 17117751 ~ 17118264 (-)
G105578 NA non-coding upstream 209935 17152171 ~ 17153593 (-)
G105598 NA non-coding upstream 382224 17324460 ~ 17324955 (-)
G105597 LOC104923197,LOC104943958 non-coding upstream 392168 17334404 ~ 17335952 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 263485 16524356 ~ 16674855 (-)
unc5a unc5a,LOC102788949 other downstream 834546 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 1066391 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 1319232 15598343 ~ 15619108 (-)
G105086 NA other downstream 1803604 15133530 ~ 15134736 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 15407 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 199846 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 224660 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 579905 17522141 ~ 17577811 (-)
kif3a kif3a other upstream 725848 17668084 ~ 17748547 (-)

Expression


Co-expression Network