lpar4 (lpar4)


Basic Information

Item Value
gene id lpar4
gene name lpar4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 2567904 ~ 2575289 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814458.1
GGCCGTGCAAGCAGCTCTCCACGTACACGGCGCATCACGCCTCGCGCACAGCCCCCTCCAGCCGGGTGAGCAGGCGCGGTGGACGGTGATGTGGTCCCATTCCTAGCGGACGGACGGAGCGAGTCGTCGGCATTAATTGAAGAACTCACACCCACAGTGTTTGTTGTCGCTAATTAGCTTCAAAGCACTTCCATGACTTCTCCGTGCTTGTTTGGTACAATTTGAGTCGGGACGGTCGGAAACCACGAGCCAAACAGACCGAGCAGCACCAACACGTTTGGGAGAAGAAGTATGGAGTTTTTCTTCTGACAGCTGCGCCGCTGCACTGCTGCCAGACAGACATCAGTGACCAGAGGATGACTGACCATCCCCGCAGCCGTGCATCCTGACTGTCCCTGCCTCCATTTGTGTGTCTGAACGTCCACGATGACTTGGAGGAGACTTGACGGGTGGATCCCCTGCTGACACCTCTGGTCCTCAGATATCCGCCCCGACTCCCCCCTTTCCTGACGGCTTTGGTGTACCCTGTTTCTGTGGAGCGGCCTCCCTCTTAAAGCTGCCACCATGGCTAGCCTGGTGCTCAACGAGACCGGAATGGAGGACTGCGGCATTGACGACTCCTTCAAGTACAACTTGTACTCGGTGGTTTACAGCGTGGTCTTTGTCTTAGGCCTGACCACCAACTGCGCCGCCCTCTTTGTATTCTGCTTCCGGATGAAGATGCGCAACGAGACCACAATGTTTATGACTAATTTAGCACTATCCGATCTAGTGTTTGTTTTCACGCTGCCGTTCAAGGTCTTCTACAATGTTAACCGCCATTGGCCATTTGGAGATGGACTGTGTAAGGTCTCAGGAACAGCCTTCATCACCAACATCTACGGCAGCATGCTCTTCCTCACCTGCATCAGCGTGGACCGCTTCCTGGCGATAGTCTACCCGTTCCGCTCCCGCTCCATCCGCACGCGCAGGAACGCGGCGCTGGTGTGTGCCGCCGTGTGGCTGACCATCGTAGGAGGAGGGATATCAGTGACCTTCTTCTCCACCATTAACAGCACAAACAGAGCCACCACTTGCTTTGAGGGCTTCTCCAAGAGCACCTGGAGGACCTACCTGTCCAAAATCACCATTTTCATCGAGGTTGTGGGCTTCCTTCTCCCCCTCCTGGCCAACTTGGTATGCTCCTTGCTTGTTCTGCGGACGCTACGGCGTCCGATGACTGTTGGTCATGGCTGCGACAGCAAGAAACGTGTCCTGCGGATGATTTTGGTCCATCTGGGCATCTTCATCATCTGCTTTGTCCCTTACAACTCCATCCTCTTCCTGTACGCCCTGGTGCGGACCCAGGCCCTGGCTAACTGCGCGGTGGAGCGCTTTGCCCGAACTCTTTACCCCATCACTCTGTGCCTGGCCAGCCTCAACTGCTGCCTGGACCCTGTGGTCTACTACTTCACCTCAGAGAGCTTCCAGAAAAGCTTGACCATGGGAGGCAAAGGGTCGGGCTCCCGGCCCGAGAGTATCCCCCGCAGCGACACTGAGACCCAGGACACAGAAAACACTCTCCCCAGAGACACCCACACTCTGGCCAGCAATGGAAAAGAGTCAAAGGTGTCTGAGAGTCAGTTCTGACTCAGCAGGGACAAAAGGCAGAAAAGAAGGACAGTGTGGGTTTGACAGGAGCCCTGAATTTGACAAATAAAGCAATCAGCTGTTTGGTCCTGGAAGTGACAAAACACATAACTCAGCAGATTAGTTAAGTCCTGAGGTAAGTCCTGAGGTATGGCCTGGGCTTTACGGATTAATCCACCGCTGGAGCGCAGAggaatgtatctgtgtgtgtttattatgaGAGAACACTACAGGGATCAGAGACCCAGCCAAACCAGGACTATTGTCCAGTGACACGCAGAGCCTCTAAAAGAGACTGCAACACATCATCACTCAGGCTTAACactcacaaacactcacaaatGCACTGGATTGTGGATAGAATGGAGATTTCCATCCACATTGTTGAAATATGCTGTTTAGTACTTTTGTAACACACTGAGTTTTATTGTTATGAAGTTGAAGCTTTCACAGCACATTATATCATTTTAGACATTAATGTTCTGGGACTCTTTAGTGTGGTGAGACCCATTGTTGTTGTAACACAGCAGCGCGCTGACCCACTGAGTTAGATGTGTCTCATGTTGACGTTTTGAGACCATTAAATGTCTGTTTCAAATTGCA

Function

symbol description
lpar4 Enables lysophosphatidic acid receptor activity. Acts upstream of or within angiogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human LPAR4 (lysophosphatidic acid receptor 4).

NR:

description
lysophosphatidic acid receptor 4-like

GO: NA

KEGG:

id description
K04275 LPAR4, GPR23; lysophosphatidic acid receptor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814458.1 True 2232 mRNA 0.52 3 2567904 2575289

Neighbor

gene id symbol gene type direction distance location
p2ry10 NA coding downstream 2724 2558237 ~ 2565180 (-)
gpr174 LOC103366855,LOC104946189,LOC104946188 coding downstream 10314 2547232 ~ 2557590 (-)
tbx22 LOC103366841 coding downstream 52340 2507602 ~ 2515564 (-)
LOC120567016 fam46d coding downstream 78835 2481463 ~ 2489069 (-)
sh3bgrl sh3bgrl coding downstream 111661 2441648 ~ 2456243 (-)
LOC120566298 NA coding upstream 12328 2587617 ~ 2590619 (-)
polr1d polr1d,LOC104920592,LOC104965767,LOC103366847 coding upstream 88938 2664227 ~ 2673203 (-)
pdgfrl pdgfrl,LOC100690066,LOC101468828 coding upstream 138885 2714174 ~ 2720027 (-)
zdhhc2 zdhhc2 coding upstream 200116 2775405 ~ 2793673 (-)
micu3b micu3,LOC104941480,LOC104920617 coding upstream 220960 2796249 ~ 2816202 (-)
G102824 NA non-coding downstream 20952 2531508 ~ 2546952 (-)
LOC120566605 NA non-coding downstream 29983 2536661 ~ 2537921 (-)
G102816 NA non-coding downstream 34365 2458068 ~ 2533539 (-)
G102822 NA non-coding downstream 66509 2500656 ~ 2501395 (-)
G102788 NA non-coding downstream 136629 2431035 ~ 2431275 (-)
G102849 NA non-coding upstream 50285 2625574 ~ 2657620 (-)
G102913 NA non-coding upstream 111575 2686864 ~ 2687080 (-)
G102914 NA non-coding upstream 112720 2688009 ~ 2690563 (-)
G102915 NA non-coding upstream 115542 2690831 ~ 2693555 (-)
G102916 NA non-coding upstream 119063 2694352 ~ 2694614 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 369986 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 1726286 838946 ~ 841618 (-)
tmsb2 NA other downstream 2099454 466290 ~ 468450 (-)
G102276 NA other downstream 2336460 220592 ~ 231444 (-)
slc7a2 slc7a2,LOC102301583 other upstream 150171 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 315681 2890970 ~ 2898545 (-)
LOC120567496 NA other upstream 320882 2896171 ~ 2896313 (-)
guf1 guf1,LOC102797887 other upstream 1048870 3624159 ~ 3642640 (-)
G103268 NA other upstream 1327702 3902991 ~ 3925309 (-)

Expression


Co-expression Network