LOC120567479


Basic Information

Item Value
gene id LOC120567479
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 15127898 ~ 15132154 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814459.1
CTGCCAGAACCCGACCGTGGTTTCCAGGGAAACTGGAAATTGTGAAGCTTTTCTATAGACACAGCCACAGCTAAGAGAGCGAGGATTGCCTAACATAGATTATTCTAGGGACAAACCTGCAGCCACTGCAATCCCTATCAATCAACAGTGGAACTGTACGGACAGATGTGGGTCTCTGTCAACAGTGAGATTTTGCGATGTTTGTCCcatatgtgagagagagagagttgtgaaGAGACTTCAGTCTGACTTGGACTGCTGAGGTGCTTCCACCACTTTAAATGCAGAGACAAAATGGGAAGTCTGAAGGACAAGATGAGAGGTCTCAGAGAGGACCGCAAGTCCTGTGAGAAGACGGACGATGGAGAGCGTCCGGGCGGCTCCGACGGCAGCGCTGCGCCTGAGGGACCTGAGACAAACACGAGTCAAGAGTCAGCAACTCGTCAGCCACAACTTCACATGAACCCCGGCTACGTTGAAGAGAGAGACCAGAGTGAAAAATCCAAAGATCGAGAGCTTTCAGGAGAGGGTTGCGTTAAAGAGTCTACGCAGACTGACACCGTCCCTCTTACACAACACACTGAAGAcgatgaaacagcagcagcagcagcagcagcagcagcagctacacaTAACGACACGGCGGGCTCGAATAAGTCCCCGGGTGACGGAGTTGGAGTTGGTGAAATTCAGGAAGAGACGTCTAGGGATAAAAACGTGGCtcatgaaatagaaaaaaagacagccATTGAAAATATATTGGTGCCTGTGCCAGCAAGTCCGGGCCCCTCAGATCCACGATCCCCAGCTCCTTGTGGCCAGCGCCACATGCCCACACAGGTCAGCCTGGAGGTGGTCCAGTGTCGCTCTGCGGCCACCAGCCCCATGACGCCTCCCGAGGGCGGCCACTCCTTCTTCTTCCCGAGCTCTTTTGGGAAGCCAGGAGCCGTGGGTGCCGTCACTAAAGACGCTGAGCTGCAGGTGGGTCACCAGGTGGAGTTCTGCTCCGTGGCCACGTCCCCCATGACCCCTAAGACGCCCTCGACCACAGCTTTCCCAGAGCTCAGCGACAGAGAGGCGGCGCAGAAGCAGAAGGGGGAGAATGTGAAAAAGAGTGACGCGCAGAGGGAGAGTGACAAACAAGAGAGTTTCCCCGTGACAAAAAGTCTACAAGAGGCCGAGCCCGAGATAACTGGAGCTCTGGGAAGTATCACGTCAAAGGAGCCGAGTGAGGGCTTCAGCTCAAATGCGTCTCCAGAGATCTCCGCCAGCTGCGCTGCTGCCGGGTTAGTAGTTTCACCTGTAACCCTGCGGGATGGCAATCAGCCGTGTAAACAGCAGAGGATGGGGAGTATGGACCAAGACATCACCATTCTGGTGACCCACTATGGCAAcaatgaggaggaagagggagagaagtCGGAATCATCTTGTTTTACCATTGAGCCAGAGATGGTCAAAATAGACGAATATGAGGAACTAAGAGAGAACAGCGGTGATGTAAAGAGGGAGGACGGAATGGAAATGATCTCCGCAGGAACGGTTGCCCCTGATGTACAAGACGCCTCAAACTCCAACTGTGAAGAATCCTCTGTGTCCGCTTGTGACGAACCAAAGACAAACGTGAACGCTGAAAGTTCAGAGGCGGGAGAAACCAAAGGTGCGTGCGGAGAGTTGAGAGACGCGACAAAGCCTCCCGTCCCTGAATCTCCAGCCCCCTTCGGCTGCCACAACATCCGCACTCAGGTGAGCCTGGAGGTGGTGCAGTGTCAGTCTGCGGCCACCAGCCCTATGACCCCTCCCGAGGGCGACCAAGCCTTCTACTTCCCCAGCTCTCTGGGGatgggtggaggtggaggtggaggggtCGGCACGGAGACCAAAGACGCCGAGCTGCAGGTGGGTCAGCAGGTGGAGTTTCGCTCTGTCGCTACAGCGCCCATGACCCCGAGGACGCCCACCGTCACGTTTTTTCCTGAGATCAGGAAGGACGCAAGCACAGAGGAGAAGatagtggaggaggaagaggaggacacACAGGCGCAGGTGGCGGAGGacaaagaggaggagaaagtaagcggagagaaaaaagaagaagacacaAAGGAGGCACCGGATTGCGAGGAGCCGGTGCAGGAAGTGAGCTGGGATGAAAAGGGGATGACGTGGGAGGTGTACGGGGCGGTGGTGGAAGTGGCAGTGTTGGGCTCGGCCATCCAGAAACACCTGGAGAAACAGGTGAAGAAGCAGAAGCCCTCCATGCCTCCCCCTCCTCCGCTCAACCCCTCCGCCATGCCCCTCACTCCCGAGTGCATCCAGGGCGGGGGTTCTGGTTTTGGTTCGGGTAAGGGCCGGGCGGGGGAAAGGGGAGGGCGGGATGGGGAGGTGAGCCGACGCAGAAGAAACCCCTTCCGTCAGCTGATGGAGAACATGCAGCAGCCTCACTGCTGCTCCAGAGCTCACACCGCGGAGTGACACGAGAATCCCGTCGAGGAAACAACAGCTGGTTGGAGGAACACCTGATCACATGACACACGTGTCTGCGATAGAGTGATTTACTTCAACGAGACTTCAAAATGGTGAGAAGGAAATCACCTCACaccagacagacaaaaaaagaagcacaaaAGCATTTAATATCCAACTTTTATAAAAGAGCATTAAGAATCAACCAGCTCGTAGAAGATGGGGTAtcgtttttttctccttttcttggAGTTCCATGTTCAGAAAAACGATCAGTGCCATCGTTAGCTCTTCTcctttaatatttttcaccaaGACCATTCAATTGTCCACTGAGTCATTTTAGCTGttgatgtttttctgtttttttttttttaatgcacctCAGACAATATGAAGCCATGGCAATCCTTCTGCTGGTTGCTTACAAGCTTAACACAGCTTTAACTGTGGGAGAGGAGTGACAGCTTTTGATTGTGATTTATAATGTGattttgtttcaaatgtatATTAAGTTAAAATTGATccctggcgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgcgtgtgtgcgtgtgtgtctccctACCATTAGTGCAGGCTTTTGTATTGTATTCTGCTTTTAGATTTGGCACAATGCTTTGACTTGTTTGTATTGTGAAAGTATAAAAAATGTACAAATGGCGAGCACAATCAACACCTGATATGATGAGGATATTTTTAGTCATTACTacttaatgtattttaatgccTTGATTAGTGATTCCGTTGTAAAAGATGTGATGAAAcctattttaactgtgttttaaTTCAAAGGTTGTTACAGTGCCAGTGGTGTTGGTGTTCATACGTTGAGTTCATAAAAGCGGGTTTAAATCCACATTTGGAGAAATTGATTTTTATTCACGTTGCACTTGTGATACATTCATTTATATGTCAGTAAACAGTGAAATACTATTTTTAATCCACTGCTTGTAGGAAGTCACActgcatgagttttttttttaaataagtatcTCAAACTCAAAGCAATCAATGACAAATTAAACAGGCAAAAGGTTAACCCTTTTGGCTGACATGCGTTCATAAATAAGTAATTCATTCATACTTTGATATTATGcaatattttcttctttttgaatTTGTTATTTCTAATAGAAGCAGCTGCAACACAAATTAACATTGTATGTTGACATAATGTATAATACAGTTTGTTTCAAAGCAAACCAAACAGTTTTTAAACCGCCgcttaatatacagtattaacTAAAATAAAGTGATCAACATGTGCAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814459.1 True 3763 mRNA 0.49 2 15127898 15132154

Neighbor

gene id symbol gene type direction distance location
nek12 NA coding downstream 74648 15050136 ~ 15053250 (-)
drd1a drd1,LOC103470866,LOC103144507,LOC106953475 coding downstream 95630 15028908 ~ 15032268 (-)
nkx2.5 nkx2-5 coding downstream 226608 14898308 ~ 14901290 (-)
ppp2r2ba ppp2r2b,LOC107086445,LOC104946885,LOC100708080 coding downstream 245082 14834054 ~ 14882816 (-)
gpr151 gpr151 coding downstream 294062 14829320 ~ 14833836 (-)
sncb sncb coding upstream 2972 15135126 ~ 15149929 (-)
ctnna1 ctnna1 coding upstream 309265 15441419 ~ 15516760 (-)
LOC120566876 LOC104959829 coding upstream 488860 15621014 ~ 15638360 (-)
dctn4 dctn4 coding upstream 539481 15671635 ~ 15688818 (-)
tnip1 tnip1,LOC103376067 coding upstream 566183 15698337 ~ 15715960 (-)
G105049 NA non-coding downstream 99032 15028350 ~ 15028866 (-)
G105040 NA non-coding downstream 102489 15025016 ~ 15025409 (-)
LOC120567075 NA non-coding downstream 174843 14948393 ~ 14953055 (-)
G105001 NA non-coding downstream 236387 14890593 ~ 14891511 (-)
G104999 NA non-coding downstream 239691 14883859 ~ 14888207 (-)
LOC120567002 NA non-coding upstream 72979 15205133 ~ 15436933 (-)
G105096 NA non-coding upstream 142401 15274555 ~ 15274923 (-)
G105110 NA non-coding upstream 198771 15330925 ~ 15331139 (-)
G105113 NA non-coding upstream 231482 15363636 ~ 15363941 (-)
G105147 NA non-coding upstream 394912 15527066 ~ 15529259 (-)
rnf44 rnf44 other downstream 19300 15089404 ~ 15108598 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 388405 14735192 ~ 14739493 (-)
uvssa uvssa,LOC104961899,LOC106533076 other downstream 554405 14537100 ~ 14573493 (-)
G104837 NA other downstream 871857 14150492 ~ 14256041 (-)
G104656 NA other downstream 2984154 12142700 ~ 12143744 (-)
G105086 NA other upstream 1376 15133530 ~ 15134736 (-)
tspan17 tspan17,LOC103361971 other upstream 466189 15598343 ~ 15619108 (-)
hnrnph1 hnrnph1,LOC102791917 other upstream 733906 15866060 ~ 15871949 (-)
unc5a unc5a,LOC102788949 other upstream 828043 15960197 ~ 16103794 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 1392202 16524356 ~ 16674855 (-)

Expression


Co-expression Network