ankrd13d (ankrd13d)


Basic Information

Item Value
gene id ankrd13d
gene name ankrd13d
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21485633 ~ 21494051 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814467.1
AATAGACTTCATCGTAACAAAGCTGCGTGTTGCACAGCAGCTTGACAAATGTGGTCTGGTTTAATGATCGTTCAGGACTGAGTGCTACCGGCAGCAGCTGTCACCTACATCATATATCGGATGCCCTCAACTCAAGTGACCTGGATGTGAAACTGGAATAAAGGCCGTATCTCGCTTTATTTTGATACCGTAACGCTGCAATATAAACAGGGGGGGTGGTTGCAGTAACAGCggggtagctagctaactttacCAGCCGGCGATTTCAcccatattttcttttcttcggATCATATCCATCGTGAAAGAAAATGAACGGACTTGGGAAGTGCATTTCTGGCCCGCTACATTAGTTGCCTTGCTTTGTGAAAAATGGAAAACCGGTGCCAAGAGGAGCAGGAAACAATGTTATTAGCCAGTTAGCCAACGTTAGCTCAGCTAGCTGTAGTTAACTACATCAAATTAGTGGGCTGAGTTGGCGCGGCTAACTCAGCCCACTAATTTAAATAGGCACGCACAATATTCTACTTGGTTTGCtgcctagcgttagctacttGGATAGATTTGCTTAGTGACATGTTTTTCCAGTGAAACACTTGCAGCGTTTACCCTTTTTTCTGACGTTAActaagctagctaacgctagctaaccaGTTGTGCCGTTCAGCGCTGAACTCGTTGCTACAGTCTGCTGTTGTGTCACTGCAATCTGTTGGCTGCAGAAGTCATATTGCAAACAAAGCTTTACTACTGTTTAACTGTCAAGCGGACGACAACCATGGCTCAAGAAGCGTTTCCTCTGCATTTTCTTGTGTGGAACAATCAGTACTTGGAGCTTGACCGAGAGCTGCAGAAGAAAGAGCAGGATGTAGAGCGCCTGGATCCGAGAGGGCGCACCCCGCTGGAGCTGGCTGTATGTCTGGGCCACTTGGAGTCAACCCGGGTGCTGCTCCGGCACGCAGCTGACCCGACACACAACAACGCACAGGGCTGGGCCATCTTGCAGGAGGCAGTGAGCACTGGTGATCCTGAGCTGGTTCAGCTGGTGCTTCAGTACAGAGACTACAAACGTGCCACTGAGAGATTGGCGGGCATCCCAGAGCTGCTCAGCAAACTAAGACAGGCGCGGGACTTCTATGTGGAGATGAAATGGGAGTTTACCAGTTGGGTGCCCTTGGTGTCGAAGGTGTGTCCCAGTGACGTCTACAGGGTGTGGAAAAGCGGCTCGTGCCTGCGTGTGGACACCACCCTCTTGGGCTTCGAACACATGACCTGGCTGAAAGGACGACGCAGCTATATCTTCAAGGGCGGAGatgaaggCGCTGTGGTGATGGAGGTGGACCATGAGAAGCAGGTGGTGTACACAGAGCCACTCGTGTTGTCTCCCCGTGACGCACCCTCCCTCCTGGCAGCCATGCAGCCGTCGCAGGAGAACACAGCCCAGAGACTGACATCGCCCATTGTCTCCACGCACCTCAACACACGCAACATTGCGTTTGAACGGAACAAGTCAGGAATCTGGGGCTGGCGTTCTGAGAAGAGTGAGGTGGTCAGCGGGTATGAAGCTAAGGTTTATAGTGCCACCAATGTGGAGCTGGTGACTCGGTCAAGGACAGAGCATCTATCAGACCAGGATAAGTCGAGGAgcaaagGCTCAAAGACTCCTCTGCAGTCCTTCCTGGGGATTGCTGAACAACATACAGCTCACAATGGGaGTAACGTGTCCCAGTGTGCCAGTCCTCACAACCCTACAGCCATCACAGCTGAGGAATACTTCAACCCGGAGTTCAACCTGAACAGCCGGGACATCGGACGTCCCGTCGAGCTTACCAGCAAAGTCCAGAAGTTTAAAGCGACACTGTGGTTGAGTGAGAGTCACCCTCTGTCTCTGGCTGAGCAGGTGACACCCATCATCGACCTCATGGCCATCTCCAACGCCCACTTTGCCAAGCTACGTGACTTCATCACCCTGCGCCTGCCACCAGGCTTCCCTGTCAAGATAGAGATTCCCCTGTTTCACGTGTTGAATGCCAGAGTGACGTTCAGTAACCTGTGTGGCTGCGATGAGCCGGTCAGCTCTGTGACTGTTCACGCAACAGAGGGCCCCGAAGAAGCTGGTCAGACTCCCCCTCCCTTACACTGTGAGGTGGACCCCTCGGTGTTTGAGCCCCCAGCAGACTACACCACCCTCGGTCCAGGCCGCAGCGAGCCAATGAGGGACGAGGATGACAACCTGTTGCAGTTCGCCATCCAGCAGAGCCTGCTGGACGCCGGCACAGAGAGTGACCAGGTGACCATTTGGGAGGCTCTGACCAACAGCCGCCCGGTGCCCCCGTCTCCGCTGTATGAGGAAGACTCTCAGCTGGAGAGgGCAATCCAGGAGTCTCTGTCCATCTCGCTGGCcagcagagagggagaagacGCGGTCGACCCCAGCCTGCCTGCCTCTGTCTCCCCGTCGGGCCCCACCACCAACTCCCCGCTCTCCTACAGCACAGTGACCAATCCGCGGTTGTCAGGACACTTCGGTGTGGCGTCGAGCTTCGATGAGCAGCTGCGTATCGCCATGGAGATATCGTGCCGGGAACAGGAGGAGATGGACAGGAAGcaaaaggaggaagaggatgagcTGGAGAGGATCCTGCAGCTGTCACTCACCGAGAAGTAATGTCGTCACAACAACAATGGAGGCGTGTCTTCATTGTGCAACAGTCTTCttaatttattctgtttttatttttttgaatccTGAGATGTTAAGTTATTACAGATATTTTATTTGTCTTTCTCACACGAAGGCTGCTACAACAGAGTGTAAAGGACCAGAATATAAAAAGTGTGAGGGATAAATAAGAAGAGGTGGAAACAGGTACTCTGAATCACACTAAAGTGAAGGAGGAGACAAAAGGGAgacagtttgtttttcttttttaattgaaCATTTTTCACAGTCTTGCTGTCTTTATTGAGTGATGAATGATCCTTAAACTTTAAACCTATAACATTTTCCATGATAATgatgaaaaataagaaaatacaaTCTTAATGGACTTAACTTATACAAATATGATTATAACATTTGAAACATTTATGTTGGCTTACTCCTATgtgtgaaaaataaagaataatgaTCAtc

Function

symbol description
ankrd13d Predicted to be located in late endosome and plasma membrane. Predicted to be active in cytoplasm. Orthologous to human ANKRD13D (ankyrin repeat domain 13D).

NR:

description
ankyrin repeat domain-containing protein 13D-like

GO: NA

KEGG:

id description
K21437 ANKRD13; ankyrin repeat domain-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814467.1 True 3136 mRNA 0.51 16 21485633 21494051

Neighbor

gene id symbol gene type direction distance location
kdm2ab NA coding upstream 212 21469083 ~ 21485421 (+)
ran ran coding upstream 38907 21443557 ~ 21446726 (+)
ndufs8b ndufs8,LOC102288815,LOC100707179,LOC101466861 coding upstream 42745 21438251 ~ 21442888 (+)
rad9a rad9a coding upstream 56131 21423052 ~ 21429502 (+)
p2rx3a p2rx3 coding upstream 70009 21406885 ~ 21415624 (+)
LOC120566710 NA coding downstream 17356 21511407 ~ 21517692 (+)
LOC120566709 LOC104958698,LOC101067481,LOC103391036,LOC108243082 coding downstream 24079 21518130 ~ 21531269 (+)
LOC120567432 LOC102311101,LOC102216180,LOC101470192,LOC107374508 coding downstream 50940 21544991 ~ 21562298 (+)
LOC120566694 LOC107085665,LOC104958696,LOC108243013,LOC101162933,LOC106920850 coding downstream 82614 21576665 ~ 21598950 (+)
LOC120566696 LOC104958695,LOC100708615,LOC102215588 coding downstream 114859 21608910 ~ 21618781 (+)
G106851 NA non-coding upstream 38537 21446882 ~ 21447096 (+)
G106712 LOC103354767 non-coding upstream 280257 21204689 ~ 21205376 (+)
G106709 ctnnd1 non-coding upstream 283463 21196804 ~ 21202170 (+)
G106708 NA non-coding upstream 288979 21196179 ~ 21196654 (+)
G106707 NA non-coding upstream 290784 21193066 ~ 21194849 (+)
G106972 NA non-coding downstream 266947 21760998 ~ 21761444 (+)
G106975 NA non-coding downstream 269316 21763367 ~ 21763641 (+)
G106992 NA non-coding downstream 349611 21843662 ~ 21843950 (+)
G107025 LOC104954424,LOC103390732 non-coding downstream 836961 22331012 ~ 22378340 (+)
LOC120566464 NA non-coding downstream 896302 22390353 ~ 22397051 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 16806 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 134655 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 202404 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 538218 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 1133466 20351721 ~ 20352167 (+)
G107163 LOC103356264 other downstream 1368139 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 1409704 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 1456544 22950595 ~ 22997038 (+)
G107168 NA other downstream 1460921 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 1605974 23100025 ~ 23132685 (+)

Expression


Co-expression Network