LOC120566737


Basic Information

Item Value
gene id LOC120566737
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 25106440 ~ 25107622 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640455.1
AGGGGCCTGAGGGGAGGGACAAAGGGGCGTGGTGTACAggtaatttgcataggctactgggAGAGACCGCAGCTCCACAGGCATCCTCACAGATTACCCATATCTGCAATGGcttccacaagttcacctggaacctccaaatctcaaGCACCTTCGACTGGGAGGCAGCTTACGGAGAGACTGCTGAGAAGGCTTCAGGAAGTTCTGCAACGTCAGCCTGTGGATTTTGACTATTTACACTTACACTGTTTTTAGTCATGAAATGGGACTTGTACCCTTCGCGCATAGGCCAGTACACATTAACCCTCATATGCATTAtcattgcatttactgtaatttgttAAGAAATATAGAGTCAAATTCTTacttgaatatatttatttgttattcacTGAAAAGGTACAGATTTAACTGTTTTGCTGGAGcccatactgtaaatgcatgtcATTTCAAAAATTGTTAAGGATTAAAATCAGTACTACATATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640455.1 True 489 lncRNA 0.42 2 25106440 25107622

Neighbor

gene id symbol gene type direction distance location
zdhhc9 zdhhc9 coding upstream 125640 24948008 ~ 24980800 (+)
srpx2 srpx2 coding upstream 178472 24920307 ~ 24927968 (+)
bcorl1 LOC103352940 coding upstream 213197 24867369 ~ 24893243 (+)
xkrx xkrx coding upstream 266379 24824055 ~ 24840061 (+)
LOC120566612 LOC100702800,LOC102305317,LOC101472616,LOC103353306,LOC105925836,LOC107089258 coding upstream 522573 24569048 ~ 24583867 (+)
clic2 clic2 coding downstream 73366 25180988 ~ 25186479 (+)
c1galt1c1 c1galt1c1 coding downstream 87121 25194743 ~ 25197196 (+)
cul4b cul4b coding downstream 94528 25202150 ~ 25214547 (+)
lamp2 NA coding downstream 107498 25215120 ~ 25231503 (+)
tmem255a tmem255a coding downstream 133945 25241567 ~ 25251643 (+)
G107821 NA non-coding upstream 159104 24947121 ~ 24947336 (+)
G107820 NA non-coding upstream 159498 24946738 ~ 24946942 (+)
G107819 NA non-coding upstream 160736 24945327 ~ 24945704 (+)
G107818 trmt12 non-coding upstream 161900 24943550 ~ 24944540 (+)
G107803 mid1ip1,LOC104928730,LOC103352948 non-coding upstream 168675 24907352 ~ 24937765 (+)
G107958 NA non-coding downstream 144503 25252125 ~ 25252468 (+)
G107972 NA non-coding downstream 163917 25271539 ~ 25273631 (+)
G107981 NA non-coding downstream 180497 25288119 ~ 25290199 (+)
G107985 tnmd non-coding downstream 273091 25380713 ~ 25394758 (+)
G107988 NA non-coding downstream 278846 25386468 ~ 25387635 (+)
apln NA other upstream 9417 25073213 ~ 25097023 (+)
nox1 nox1 other upstream 259547 24840186 ~ 24846893 (+)
G107789 tmem35a other upstream 297739 24805200 ~ 24808701 (+)
arhgef6 NA other upstream 652527 24387484 ~ 24453913 (+)
LOC120566416 NA other upstream 1241166 23855525 ~ 23865274 (+)
rpl39 NA other downstream 171946 25279568 ~ 25282207 (+)
LOC120567498 NA other downstream 173326 25280948 ~ 25281080 (+)
sept6 sept6,LOC106945475 other downstream 183985 25291607 ~ 25310218 (+)
btk btk other downstream 1353666 26461288 ~ 26476570 (+)
timm8a timm8a other downstream 1369174 26476796 ~ 26479297 (+)

Expression


Co-expression Network