LOC120566871


Basic Information

Item Value
gene id LOC120566871
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 2341197 ~ 2341905 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640479.1
CCTCGGTTTTAAAACAAACGACCCTGCTGGAGGCAAGCTGCTTTTCAtgacaaagatgaataaaTTTCAGATCAGTTTATGCCTTTGCATCTTGCTGTTCCAGTTTCAAGAAGTTAAGGAAGATAACTGGAGATGTGATAACGATACCAGaagactgagaagaaACTGCCCCTCATTAGAAAGATGATGGAGACCACATTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640479.1 True 203 lncRNA 0.41 3 2341197 2341905

Neighbor

gene id symbol gene type direction distance location
si:ch211-26b3.4 LOC102207626,LOC101486356,LOC102776433,LOC103359564,LOC102290361 coding downstream 43075 2221502 ~ 2298122 (-)
apool NA coding downstream 121869 2210260 ~ 2219328 (-)
LOC120567407 LOC102775661,LOC102289345,LOC102208181 coding downstream 137039 2200363 ~ 2204158 (-)
arhgef9a arhgef9,LOC102797990 coding downstream 479085 1799404 ~ 1862112 (-)
LOC120567293 NA coding downstream 546075 1791628 ~ 1795122 (-)
LOC120566307 pou3f4,LOC102778357 coding upstream 11654 2353559 ~ 2355799 (-)
LOC120567491 LOC104946186,LOC103359559,LOC102079772 coding upstream 58367 2400272 ~ 2405790 (-)
LOC120567490 LOC103359558,LOC102292217 coding upstream 64215 2406120 ~ 2419903 (-)
si:dkey-237j10.2 NA coding upstream 95696 2437601 ~ 2439326 (-)
sh3bgrl sh3bgrl coding upstream 99743 2441648 ~ 2456243 (-)
G102754 NA non-coding downstream 30375 2308466 ~ 2310822 (-)
G102749 NA non-coding downstream 40783 2299673 ~ 2300414 (-)
G102748 NA non-coding downstream 41976 2298788 ~ 2299221 (-)
G102741 NA non-coding downstream 119751 2219576 ~ 2221446 (-)
LOC120567184 NA non-coding downstream 404010 1936573 ~ 1937187 (-)
G102774 NA non-coding upstream 42013 2383918 ~ 2384235 (-)
G102776 NA non-coding upstream 42402 2384307 ~ 2384671 (-)
G102788 NA non-coding upstream 89130 2431035 ~ 2431275 (-)
G102816 NA non-coding upstream 116163 2458068 ~ 2533539 (-)
G102822 NA non-coding upstream 158751 2500656 ~ 2501395 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 143279 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 1499579 838946 ~ 841618 (-)
tmsb2 NA other downstream 1872747 466290 ~ 468450 (-)
G102276 NA other downstream 2109753 220592 ~ 231444 (-)
slc7a2 slc7a2,LOC102301583 other upstream 383555 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 549065 2890970 ~ 2898545 (-)
LOC120567496 NA other upstream 554266 2896171 ~ 2896313 (-)
guf1 guf1,LOC102797887 other upstream 1282254 3624159 ~ 3642640 (-)
G103268 NA other upstream 1561086 3902991 ~ 3925309 (-)

Expression


Co-expression Network