LOC120566994


Basic Information

Item Value
gene id LOC120566994
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 28003534 ~ 28004849 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640499.1
CTCAAGTGGAATAACCTGGAAATGATGACTGTGGTTTACTTACTGCTGATACTCAGAGTGGGACgatgcACAGATGATCGGATCTTTGAGAACAGGACTGTTGGTGTGGGAGGCGATGTGAGACTGACTTGTCCTCGCAAGTCTACGGGAAGCTTGTTTTGGATCAGGATCGTTTCTGGAGAATTTCCTAAAATCTTAGGAAAAACATTTAGCTTTGAGAGTGATCCTCGCATTACCGCCACAGAGGAGGACATTTGTTCTGCATATTGCAAAAGCAAGGCTAAGTGATACTGCAGTTTACTATTGTATGAAAATACATCGATAAAacttcacatttttgaaaggaGCAGACCTGAGAGTTGAAGGACCAGAACCTGATCCCACTGCTGTCCCTCCATCTGATCCAGTCGGTCCAGGAGACTCAGTGACTCTGCAGTGTTCAGTCCTCTCGGACTCTGAGAACAAGACGTGTCCAGAAGAACAAAGTGTGTTCTGTTTCAGAGCTGGATCACATCAATGTGACCCAGATTTTAATTATACTCAAGAATCCAGAGGGACTCTTGACAAAGAAATGTATCTACAGCTTCTTTAAGAACGTCAGCTCCTCTGATGGCGGGACTTATCACTGTGCTGTGGTCACATGTGGGGAGATATTTTCTGGAAACGGATCAAAACTCGAAACTGAAGCAGTCAACATGCAGGACTCTCAGAAGGACCATACAGTTCTCTGTCTGTTAGATGCTGCTTTGGCTATAAGTCTGATTGTTATAGCCTTTCTCATTTATTCAATCAAGAAGCTTGTTACGTccccatttcaatcaggagataCTTCCTTGCAAATATGAACATGTTTATTGTACAggacaaaatatgaaaaatgaaatgtgcaAAGTCTCTgaaga
>XR_005640500.1
CTCAAGTGGAATAACCTGGAAATGATGACTGTGGTTTACTTACTGCTGATACTCAGAGTGGGACgatgcACAGATGATCGGATCTTTGAGAACAGGACTGTTGGTGTGGGAGGCGATGTGAGACTGACTTGTCCTCGCAAGTCTACGGGAAGCTTGTTTTGGATCAGGATCGTTTCTGGAGAATTTCCTAAAATCTTAGGAAAAACATTTAGCTTTGAGAGTGATCCTCGCATTACCGCCACAGAGGAGGACATTTGTTCTGCATATTGCAAAAGCAAGGCTAAGTGATACTGCAGTTTACTATTGTATGAAAATACATCGATAAAacttcacatttttgaaaggaGCAGACCTGAGAGTTGAAGGACCAGAACCTGATCCCACTGCTGTCCCTCCATCTGATCCAGTCGGTCCAGGAGACTCAGTGACTCTGCAGTGTTCAGTCCTCTCGGACTCTGAGAACAAGACGTGTCCAGAAGAACAAAGTGTGTTCTGTTTCAGAGCTGGATCACATCAATGTGACCCAGATTTTAATTATACTCAAGAATCCAGAGGGACTCTTGACAAAGAAATGTATCTACAGCTTCTTTAAGAACGTCAGCTCCTCTGATGGCGGGACTTATCACTGTGCTGTGGTCACATGTGGGGAGATATTTTCTGGAAACGGATCAAAACTCGAAACTGAAGTCAACATGCAGGACTCTCAGAAGGACCATACAGTTCTCTGTCTGTTAGATGCTGCTTTGGCTATAAGTCTGATTGTTATAGCCTTTCTCATTTATTCAATCAAGAAGCTTGTTACGTccccatttcaatcaggagataCTTCCTTGCAAATATGAACATGTTTATTGTACAggacaaaatatgaaaaatgaaatgtgcaAAGTCTCTgaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640499.1 True 902 lncRNA 0.43 4 28003534 28004849
XR_005640500.1 False 899 lncRNA 0.43 4 28003534 28004849

Neighbor

gene id symbol gene type direction distance location
LOC120566546 NA coding downstream 17869 27984080 ~ 27985665 (-)
LOC120566986 NA coding downstream 20978 27945354 ~ 27982556 (-)
LOC120566992 NA coding downstream 38664 27962530 ~ 27964870 (-)
LOC120566990 NA coding downstream 61188 27940057 ~ 27942346 (-)
LOC120566988 NA coding downstream 66999 27934294 ~ 27936535 (-)
LOC120566551 NA coding upstream 45448 28050297 ~ 28057524 (-)
LOC120566552 NA coding upstream 61240 28066089 ~ 28068565 (-)
LOC120566554 NA coding upstream 116517 28121366 ~ 28122549 (-)
LOC120566555 NA coding upstream 120277 28125126 ~ 28126679 (-)
LOC120566373 NA coding upstream 143113 28147962 ~ 28150752 (-)
G108424 NA non-coding downstream 21205 27981958 ~ 27982329 (-)
G108422 NA non-coding downstream 22087 27981050 ~ 27981447 (-)
LOC120566995 NA non-coding downstream 33172 27968064 ~ 27970362 (-)
G108353 NA non-coding downstream 230553 27772676 ~ 27772981 (-)
G108352 NA non-coding downstream 231463 27771851 ~ 27772071 (-)
LOC120566468 NA non-coding upstream 90799 28095648 ~ 28096127 (-)
G108476 NA non-coding upstream 552087 28556936 ~ 28558203 (-)
LOC120566386 NA non-coding upstream 653175 28658024 ~ 28662232 (-)
G108524 LOC104954097 non-coding upstream 673430 28678279 ~ 28681099 (-)
LOC120567081 NA non-coding upstream 828326 28833175 ~ 28928905 (-)
LOC120566991 NA other downstream 47840 27952256 ~ 27955694 (-)
LOC120567057 NA other downstream 164427 27837568 ~ 27839107 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other downstream 213323 27780132 ~ 27790211 (-)
atp8a1 atp8a1,LOC102786596 other downstream 625413 27269370 ~ 27378121 (-)
LOC120567151 bend4,LOC102786006 other downstream 740833 27252395 ~ 27262701 (-)
G108433 neto1,LOC101071133 other upstream 16888 28021737 ~ 28023229 (-)
LOC120566547 NA other upstream 19721 28024570 ~ 28038700 (-)
fam13b fam13b,LOC102777128 other upstream 710014 28714863 ~ 28795508 (-)
cxcl14 cxcl14 other upstream 792449 28797298 ~ 28807994 (-)
gask1b fam198b,LOC102776406 other upstream 2342129 30346978 ~ 30356856 (-)

Expression


Co-expression Network