LOC120567052


Basic Information

Item Value
gene id LOC120567052
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16496457 ~ 16497322 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640512.1
AGGATCATGGGACCGTCACATGACGCCAGTTAGTCTCGCGAGGCCTGGCTGATGCCTGCCCTGGTTCCTGTCCTGCAGAAACAAAAGGGTATTTTTGGGCTCTAACAATAGAAGCTAAGAGAGGATGGATCTAAACTTATAAAACAGAGAGCCATTAAGTCCATTTTGGGTCGACTGTATACATTTGGTGCCGTGCGCTGGCTGTGTTTCTGGTTGAAGTCTCACTAAGTGTCAAGCCGTGACATTTCTGCTCCAGTTGGCTTTGTGTTCACCGGTCCACGCTCAGCAGATTCcccaaaacacatttgaaaagacTCTCAATAGGGAACAAGCCACAACCACTAAGAATAATGCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640512.1 True 357 lncRNA 0.47 3 16496457 16497322

Neighbor

gene id symbol gene type direction distance location
ergic1 ergic1 coding downstream 82126 16395235 ~ 16414331 (-)
npy7r LOC104967498,LOC104930063,LOC103356978 coding downstream 166946 16324573 ~ 16329511 (-)
prelid1a prelid1 coding downstream 173080 16316611 ~ 16323377 (-)
fam193b fam193b coding downstream 187041 16298820 ~ 16309416 (-)
LOC120567264 ddx41 coding downstream 199095 16287081 ~ 16297362 (-)
LOC120567053 LOC103356970,LOC107093447 coding upstream 12036 16509358 ~ 16513111 (-)
gjb1b LOC107093452,LOC101485490,LOC102291952 coding upstream 16239 16513561 ~ 16518060 (-)
LOC120567296 NA coding upstream 20832 16518154 ~ 16526951 (-)
LOC120567142 LOC104959287 coding upstream 32948 16530270 ~ 16533180 (-)
LOC120567144 LOC104923178 coding upstream 35960 16533282 ~ 16537447 (-)
G105337 LOC103356977,LOC104930064,LOC102195804 non-coding downstream 157439 16334273 ~ 16339018 (-)
G105332 NA non-coding downstream 232038 16264201 ~ 16264419 (-)
G105331 NA non-coding downstream 232594 16263231 ~ 16263863 (-)
G105292 NA non-coding downstream 440429 16055583 ~ 16056028 (-)
G105289 NA non-coding downstream 536278 15959119 ~ 15960179 (-)
G105433 NA non-coding upstream 190157 16687479 ~ 16687729 (-)
G105435 NA non-coding upstream 190734 16688056 ~ 16688590 (-)
G105436 NA non-coding upstream 191761 16689083 ~ 16689305 (-)
G105443 NA non-coding upstream 258014 16755336 ~ 16755558 (-)
G105549 NA non-coding upstream 555183 17052505 ~ 17055622 (-)
unc5a unc5a,LOC102788949 other downstream 392663 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 624508 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 877349 15598343 ~ 15619108 (-)
G105086 NA other downstream 1361721 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 1387859 15089404 ~ 15108598 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 27034 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 460321 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 644760 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 669574 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 1024819 17522141 ~ 17577811 (-)

Expression


Co-expression Network