LOC120567181


Basic Information

Item Value
gene id LOC120567181
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 6388149 ~ 6390318 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640530.1
gttgtgtgtgtgtgagagaaagaggggtAACCTGGAGGTGTTTTGCATCAGTACTTGAATGTAAACTGAAGAGGAGCCAGCCAAATAAGGCTTAggaaaaatgaaatatttaaagAAGTACGGAAGGGAGGGAGTGAAAAAGGAAAGACAGAAGAAAGGAAGGGAGCAAGAAGCCAGATgtggaaggagaaaaaaaagagaaggaatACAGAAAAAGAGGAAGTTGGATTGTCTATGTTCTGAAAGTATGTCTGTTGTGTCAATGGAGCGGCTACAAGGTACAAAGCAGTATGTATCTGGGACTTCCACAACAGATACAAAGCAGCAAAAGTGGTTATTTCGGCCATATTGATGACAGAAAGAAACGTTGTTGGTGCCTACAGCTCTTCACTGGCGAAACCTCACAGGACTCCCTTGGTTTGTTTAATTCAATAAATCGTCATGTTCaaccttctcctgcctgcctgcctctccctgcatttgggtccattATCCCCTGCTCCTCACAACATCatcgactgcaagacccaggcggaccatgctgggaaacacctgcctctcagctgatctaacagctgattggttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640530.1 True 586 lncRNA 0.45 3 6388149 6390318

Neighbor

gene id symbol gene type direction distance location
ptcd3 ptcd3,LOC102784107,LOC104953014 coding downstream 413665 5956064 ~ 5974484 (-)
LOC120567040 LOC104949792,LOC104935341,LOC107391212,LOC106530877,LOC103151698,LOC105918375 coding downstream 441599 5920351 ~ 5946550 (-)
LOC120567039 LOC103361901,LOC100704274 coding downstream 473412 5909740 ~ 5914737 (-)
LOC120567038 LOC104958725 coding downstream 486853 5897142 ~ 5901296 (-)
LOC120567274 NA coding downstream 534603 5851783 ~ 5853546 (-)
LOC120567409 NA coding upstream 720930 7111248 ~ 7112332 (-)
LOC120567393 NA coding upstream 722377 7112695 ~ 7113960 (-)
trnam-cau_10 NA coding upstream 731735 7122053 ~ 7122125 (-)
trnam-cau_11 NA coding upstream 733285 7123603 ~ 7123675 (-)
trnam-cau_12 NA coding upstream 742514 7132832 ~ 7132904 (-)
G103733 NA non-coding downstream 71136 6316730 ~ 6317013 (-)
G103731 NA non-coding downstream 129145 6258711 ~ 6259004 (-)
G103712 casp3,LOC104959742 non-coding downstream 218902 6145546 ~ 6169247 (-)
G103694 NA non-coding downstream 278404 6089062 ~ 6109745 (-)
G103661 NA non-coding downstream 366435 6010768 ~ 6021714 (-)
G103737 NA non-coding upstream 52010 6442328 ~ 6442705 (-)
G103738 NA non-coding upstream 63122 6453440 ~ 6453694 (-)
G103740 NA non-coding upstream 95246 6485564 ~ 6485787 (-)
G103746 NA non-coding upstream 302146 6692464 ~ 6692723 (-)
LOC120567445 NA non-coding upstream 304165 6694483 ~ 6695253 (-)
G103434 LOC102212171 other downstream 1802065 4575782 ~ 4586084 (-)
myot LOC103355626,LOC104955473 other downstream 1812473 4554225 ~ 4575676 (-)
fmr1 fmr1,LOC102779310 other downstream 1930322 4426517 ~ 4457827 (-)
LOC120567378 NA other downstream 1988091 4320649 ~ 4400058 (-)
smim19 smim19 other downstream 2454929 3928930 ~ 3933220 (-)
LOC120566343 NA other upstream 366474 6756792 ~ 6759576 (-)
G103806 NA other upstream 896141 7286459 ~ 7286972 (-)
LOC120567361 NA other upstream 2776972 9167290 ~ 9177633 (-)
abhd18 abhd18 other upstream 2965394 9355712 ~ 9457863 (-)
LOC120566283 magt1,LOC102791632 other upstream 3173681 9563999 ~ 9569926 (-)

Expression


Co-expression Network