LOC120567247


Basic Information

Item Value
gene id LOC120567247
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20293152 ~ 20296043 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640534.1
GTTTGCTCACTACCGGAAATGGTATATTTGAATCCAATGGCGCCAGGAAGTGTAGGTGGCACTTCCCGGGCACTGACACCAAccgtttatatactgtctatgctgcCAACACAGCCAAACTGTTTCAACAAGGACATTGCCAAAACAAGAAGAATGTGAAGAAGAATGTTAAGTATGTGTTGGCTGCGTGCAGGATTAATTCTACAGCAGCCATATGTTGTCTCCTTCACGAAAAAGATCCTATTTGAACAGCATACACAATCAAATGCTTTATAGTGggcATGGATGAAGACGCCATCAACGAGGCCACTGAAGAAACCAGTGTTGGGACATGGGGGCACTGGTATTGTCCTTGAAGGCATCAAGATGTTGCAAGATCTTTATAATGTAGCATTACCTGTTGCTACGCTGTTTGGACTAATGTACAGTATGCCCTGAACTTCAGCTATCCTGCTCGCCTTCGATCCAAAAGATTTGCATGGAACTTGATGGAGGGAAACTTACCAACAAAGCACTTGCTCTAAAAAACAGGCTCTTCCAGTGAAAGGACCAGAGAGACTGCGCCGTCAACCAAACAGCGTAGTTGTCCCTAAAGGCATCGTTGGTATGGCTGTACTCTTTggactagttttttttttttttgaattaacTGGACAGGATATGCATGGAGCTGCATGGAAATAACCTTTTGCAAACCAAGCAAAAGTTTTCTCTCTAGAAAACAGACTCCATTATAGACCAACAGGCATCTTTGGTACTGCTATACCAgatggaatgtttttttttttttacacagggttaacattttttgtcatttgaaaAACTACTTTGAAAACAGAGTGCACAATTTAAAAGGTAACTTCGGGTTTTTCAACTTGGACCTTATGTTCCTCTGTTGTTGTTACTGATGGGAAAAACGATCTtcgacattggtccagtatgaagcgagtaggcctgtcacgataacaagtTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640534.1 True 975 lncRNA 0.42 3 20293152 20296043

Neighbor

gene id symbol gene type direction distance location
LOC120566486 NA coding downstream 541445 19741886 ~ 19751707 (-)
LOC120566528 NA coding downstream 565861 19723502 ~ 19727291 (-)
spock1 spock1,LOC102785053 coding downstream 594383 19598361 ~ 19698769 (-)
dele1 kiaa0141 coding downstream 715306 19569535 ~ 19577846 (-)
LOC120566455 LOC100699740 coding downstream 724055 19528422 ~ 19569097 (-)
LOC120566601 diaph1 coding upstream 289939 20585982 ~ 20699203 (-)
LOC120566290 LOC104961544 coding upstream 405499 20701542 ~ 20703679 (-)
trpc7b trpc7,LOC101475915,LOC100711831,LOC102778756 coding upstream 419784 20715827 ~ 20770031 (-)
dock2 NA coding upstream 518435 20814478 ~ 20834647 (-)
LOC120567463 dock2 coding upstream 576814 20872857 ~ 20924459 (-)
LOC120567248 NA non-coding downstream 20745 20271239 ~ 20272407 (-)
LOC120567246 NA non-coding downstream 51442 20240488 ~ 20241710 (-)
G106428 NA non-coding downstream 110999 20180218 ~ 20182153 (-)
G106426 LOC104959913,LOC104952413,LOC102308212,LOC102796308 non-coding downstream 132668 20156336 ~ 20160484 (-)
G106414 LOC103375287 non-coding downstream 201068 20080046 ~ 20092084 (-)
G106512 NA non-coding upstream 40322 20336365 ~ 20342662 (-)
G106520 LOC102792811 non-coding upstream 103294 20399337 ~ 20399613 (-)
G106535 NA non-coding upstream 139926 20435969 ~ 20436803 (-)
G106548 LOC103374833 non-coding upstream 192844 20488887 ~ 20495578 (-)
G106556 NA non-coding upstream 210926 20506969 ~ 20545969 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other downstream 59228 20230908 ~ 20233924 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 311519 19971833 ~ 19981633 (-)
tlr1 LOC104951710,LOC102197886 other downstream 810527 19477930 ~ 19482625 (-)
tomm5 NA other downstream 856225 19435839 ~ 19436927 (-)
LOC120566717 LOC102215832 other downstream 1042716 19215989 ~ 19250436 (-)
LOC120566885 ppp2r2c other upstream 779714 21075757 ~ 21110067 (-)
G106728 mif other upstream 831795 21127838 ~ 21130970 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other upstream 882809 21178852 ~ 21187653 (-)
G106988 NA other upstream 1494210 21790253 ~ 21790725 (-)
G107015 NA other upstream 1823642 22119685 ~ 22120067 (-)

Expression


Co-expression Network