LOC120567248


Basic Information

Item Value
gene id LOC120567248
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20271239 ~ 20272407 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640535.1
GCATCGGAACGTAGGAGGCTGCCATTATTCACTCAagcgaaagagagctgtgcctgAATCAACTGTCGTCACGGAGTTAAAGGCAGTGAATTCCGTTAAAATGgtggaggaggtggagatttgagaaACGCTACGCAGGGGAGGTCCAGTCCACAGAGGGATATTGAATCACATCGACTCTTCAGATCCCAGAGACTTCCAGGGTTTAGAGATTTCCAGATCAGATGGCTGGATGGCAAGCTACAGGATCGAGACTCTGAACGTAGACGGATTTCCCTTGATTCATTCTTcatggtggtaggacaaacagaaaccaaactcatatgggccccaacgttgaacatctctaaactcttgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640535.1 True 360 lncRNA 0.48 3 20271239 20272407

Neighbor

gene id symbol gene type direction distance location
LOC120566486 NA coding downstream 519532 19741886 ~ 19751707 (-)
LOC120566528 NA coding downstream 543948 19723502 ~ 19727291 (-)
spock1 spock1,LOC102785053 coding downstream 572470 19598361 ~ 19698769 (-)
dele1 kiaa0141 coding downstream 693393 19569535 ~ 19577846 (-)
LOC120566455 LOC100699740 coding downstream 702142 19528422 ~ 19569097 (-)
LOC120566601 diaph1 coding upstream 313575 20585982 ~ 20699203 (-)
LOC120566290 LOC104961544 coding upstream 429135 20701542 ~ 20703679 (-)
trpc7b trpc7,LOC101475915,LOC100711831,LOC102778756 coding upstream 443420 20715827 ~ 20770031 (-)
dock2 NA coding upstream 542071 20814478 ~ 20834647 (-)
LOC120567463 dock2 coding upstream 600450 20872857 ~ 20924459 (-)
LOC120567246 NA non-coding downstream 29529 20240488 ~ 20241710 (-)
G106428 NA non-coding downstream 89086 20180218 ~ 20182153 (-)
G106426 LOC104959913,LOC104952413,LOC102308212,LOC102796308 non-coding downstream 110755 20156336 ~ 20160484 (-)
G106414 LOC103375287 non-coding downstream 179155 20080046 ~ 20092084 (-)
G106375 NA non-coding downstream 216098 20040097 ~ 20055141 (-)
LOC120567247 NA non-coding upstream 20745 20293152 ~ 20296043 (-)
G106512 NA non-coding upstream 63958 20336365 ~ 20342662 (-)
G106520 LOC102792811 non-coding upstream 126930 20399337 ~ 20399613 (-)
G106535 NA non-coding upstream 163562 20435969 ~ 20436803 (-)
G106548 LOC103374833 non-coding upstream 216480 20488887 ~ 20495578 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other downstream 37315 20230908 ~ 20233924 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 289606 19971833 ~ 19981633 (-)
tlr1 LOC104951710,LOC102197886 other downstream 788614 19477930 ~ 19482625 (-)
tomm5 NA other downstream 834312 19435839 ~ 19436927 (-)
LOC120566717 LOC102215832 other downstream 1020803 19215989 ~ 19250436 (-)
LOC120566885 ppp2r2c other upstream 803350 21075757 ~ 21110067 (-)
G106728 mif other upstream 855431 21127838 ~ 21130970 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other upstream 906445 21178852 ~ 21187653 (-)
G106988 NA other upstream 1517846 21790253 ~ 21790725 (-)
G107015 NA other upstream 1847278 22119685 ~ 22120067 (-)

Expression


Co-expression Network