LOC120567249


Basic Information

Item Value
gene id LOC120567249
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20273833 ~ 20275911 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640536.1
TTAATAACTTCAAAGTTAAGCGTTAAAGCTTCagtactagctagctaactttgcTTATAGTCACAAGATTCAACATAATAGCTGCTTTGTTTTGTCTGGCTTTACAAACGCCAACTGGCTGGATAAGTTCCCGGGACTCCACCACCGTGTCACCTATTTTCAGTAGATCCTGAGAGAAAACCCTTGCTTGTGGATAATGCCGGACACACCTGAAGAACATTCTGCTAATCTTCCAGAACTACTGTACTGGGTCCCACCCTGACTGGAGACAAAATGGTACCTCAAAAGAAGTCATGTAGTTTTGTAGAACAAGCCCTCCCATGCCATATGTTTTCTCTGTCCATGGCACTGAAACAACTAGCGCAACTGGAAACTTATTTATCTCTTGTATGTATTTttctactagtactactactactactattactactactactactacaactatGACTACTACTACTTAGTAGTGAATATTTTGTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640536.1 True 483 lncRNA 0.40 3 20273833 20275911

Neighbor

gene id symbol gene type direction distance location
LOC120567189 LOC101076589,LOC107376492,LOC103375150,LOC102305013,LOC101074748,LOC101075026,LOC107989589,LOC106514196,LOC107373859,LOC102308212,LOC106604881,LOC106604828,LOC103390873,LOC101161607,LOC102780923,LOC101465246,LOC101074087,LOC104937910,LOC103366336,LOC104959671 coding upstream 17420 20103023 ~ 20256413 (+)
LOC120567219 LOC104952413,LOC106456187,LOC105416208,LOC101076589,LOC106956704 coding upstream 70747 20200583 ~ 20203086 (+)
LOC120567347 LOC102308212,LOC107395890 coding upstream 84117 20186609 ~ 20189716 (+)
LOC120567346 NA coding upstream 87625 20183597 ~ 20186208 (+)
LOC120566714 LOC105417358 coding upstream 95934 20175114 ~ 20177899 (+)
LOC120567211 NA coding downstream 826 20276737 ~ 20279299 (+)
LOC120567191 LOC103471737,LOC101080210,LOC107376386,LOC106924627,LOC106950266,LOC108243066,LOC103390860,LOC103374828 coding downstream 8698 20284609 ~ 20554612 (+)
LOC120567352 NA coding downstream 59812 20335723 ~ 20338287 (+)
LOC120567209 LOC104943259,LOC103373949,LOC102209292,LOC102779498 coding downstream 109767 20385678 ~ 20389057 (+)
LOC120567196 LOC102208358,LOC101080210,LOC101061082,LOC105417360 coding downstream 119609 20395520 ~ 20398540 (+)
LOC120567444 NA non-coding upstream 275032 19973785 ~ 19998801 (+)
LOC120566743 NA non-coding upstream 318870 19950757 ~ 19954963 (+)
G106351 NA non-coding upstream 332118 19940938 ~ 19941715 (+)
LOC120566488 NA non-coding upstream 425555 19844839 ~ 19848278 (+)
G106218 NA non-coding upstream 671740 19515958 ~ 19602093 (+)
G106577 NA non-coding downstream 434598 20710509 ~ 20731673 (+)
G106679 NA non-coding downstream 824573 21100484 ~ 21100835 (+)
G106684 NA non-coding downstream 831587 21107498 ~ 21108359 (+)
G106707 NA non-coding downstream 917155 21193066 ~ 21194849 (+)
G106708 NA non-coding downstream 920268 21196179 ~ 21196654 (+)
LOC120566323 LOC102781894,LOC101481808 other upstream 212495 20028863 ~ 20061338 (+)
G106237 spock1 other upstream 621359 19604840 ~ 19652474 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 1303887 18963934 ~ 18969946 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 2374102 17890170 ~ 17899731 (+)
G105677 NA other upstream 2588134 17682919 ~ 17685699 (+)
G106465 LOC104955902 other downstream 75810 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 658818 20934729 ~ 20947415 (+)
selenoh selenoh other downstream 1003776 21279687 ~ 21283229 (+)
zdhhc5b zdhhc5 other downstream 1013620 21289531 ~ 21350978 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other downstream 1172889 21448800 ~ 21468827 (+)

Expression


Co-expression Network