trnaw-cca_11


Basic Information

Item Value
gene id trnaw-cca_11
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23161388 ~ 23161459 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_472
GACTCTGTGGCGCAACGGTAGCGCGTCTGACTCCAGATCAGAAGGTTGCGTGTTCAAATCACGTCAGGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_472 True 72 tRNA 0.56 1 23161388 23161459

Neighbor

gene id symbol gene type direction distance location
trnaw-cca_10 NA coding downstream 458 23160859 ~ 23160930 (-)
macrod1 NA coding downstream 6043 23051417 ~ 23155345 (-)
scyl1 scyl1 coding downstream 197434 22950544 ~ 22963954 (-)
LOC120566540 NA coding downstream 215460 22941936 ~ 22945928 (-)
ints5 ints5 coding downstream 221083 22935020 ~ 22940305 (-)
trnaw-cca_12 NA coding upstream 3898 23165357 ~ 23165428 (-)
kcnk4a LOC104959797 coding upstream 105455 23266914 ~ 23282656 (-)
si:dkeyp-115e12.6 LOC105026731 coding upstream 123860 23285319 ~ 23308063 (-)
stx5a stx5 coding upstream 154379 23315838 ~ 23322957 (-)
vegfba vegfb coding upstream 166791 23328250 ~ 23344198 (-)
G107220 NA non-coding downstream 187628 22928854 ~ 22973760 (-)
G107215 NA non-coding downstream 284929 22875496 ~ 22876459 (-)
G107160 NA non-coding downstream 305042 22856125 ~ 22856346 (-)
G107102 NA non-coding downstream 442618 22713037 ~ 22718770 (-)
G107097 NA non-coding downstream 475930 22683733 ~ 22685458 (-)
G107282 NA non-coding upstream 8689 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding upstream 18233 23179692 ~ 23181717 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding upstream 80578 23242037 ~ 23263899 (-)
G107610 NA non-coding upstream 630595 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 1038040 24199499 ~ 24259346 (-)
G107284 LOC103374305,LOC102779018 other downstream 26603 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 168159 22990987 ~ 22993229 (-)
G107117 NA other downstream 468557 22691160 ~ 22692831 (-)
G107015 NA other downstream 1041321 22119685 ~ 22120067 (-)
G106988 NA other downstream 1370663 21790253 ~ 21790725 (-)
rnaseh2c rnaseh2c other upstream 22733 23184192 ~ 23187058 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 723129 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 1411982 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 1700511 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 2101713 25263172 ~ 25264864 (-)

Expression


Co-expression Network