trnal-aag_2


Basic Information

Item Value
gene id trnal-aag_2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27779133 ~ 27779214 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_477
GGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGCGGGTTCGAATCCCGCCGCTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_477 True 82 tRNA 0.67 1 27779133 27779214

Neighbor

gene id symbol gene type direction distance location
bod1l1 bod1l1,LOC107705061 coding downstream 8878 27756523 ~ 27770255 (-)
nkx3-2 nkx3-2 coding downstream 35051 27740794 ~ 27744082 (-)
rab28 rab28 coding downstream 43614 27705212 ~ 27735519 (-)
hs3st1 hs3st1,LOC102780858 coding downstream 297597 27478825 ~ 27481536 (-)
LOC120566264 NA coding downstream 334086 27432341 ~ 27445047 (-)
LOC120566642 LOC107379338,LOC102290741,LOC103367381,LOC102209025 coding upstream 20612 27799826 ~ 27802336 (-)
mcm7 mcm7 coding upstream 24144 27803358 ~ 27814189 (-)
LOC120566545 NA coding upstream 36071 27815285 ~ 27836229 (-)
LOC120567058 NA coding upstream 72473 27851687 ~ 27865367 (-)
LOC120566982 NA coding upstream 129706 27908920 ~ 27910963 (-)
G108353 NA non-coding downstream 6152 27772676 ~ 27772981 (-)
G108352 NA non-coding downstream 7062 27771851 ~ 27772071 (-)
G108351 NA non-coding downstream 20438 27757793 ~ 27758695 (-)
LOC120567396 NA non-coding downstream 383102 27394158 ~ 27396031 (-)
G108194 NA non-coding downstream 687458 27091382 ~ 27091675 (-)
LOC120566995 NA non-coding upstream 188850 27968064 ~ 27970362 (-)
G108422 NA non-coding upstream 201836 27981050 ~ 27981447 (-)
G108424 NA non-coding upstream 202744 27981958 ~ 27982329 (-)
LOC120566994 NA non-coding upstream 224320 28003534 ~ 28004849 (-)
LOC120566468 NA non-coding upstream 316434 28095648 ~ 28096127 (-)
atp8a1 atp8a1,LOC102786596 other downstream 401012 27269370 ~ 27378121 (-)
LOC120567151 bend4,LOC102786006 other downstream 516432 27252395 ~ 27262701 (-)
LOC120566767 NA other downstream 683236 27068521 ~ 27095897 (-)
G108191 NA other downstream 713186 27065418 ~ 27065947 (-)
G108181 LOC103390578 other downstream 778122 26989264 ~ 27001011 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other upstream 918 27780132 ~ 27790211 (-)
LOC120567057 NA other upstream 58354 27837568 ~ 27839107 (-)
LOC120566991 NA other upstream 173042 27952256 ~ 27955694 (-)
G108433 neto1,LOC101071133 other upstream 242523 28021737 ~ 28023229 (-)
LOC120566547 NA other upstream 245356 28024570 ~ 28038700 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnal-aag-129 NA coding NW_023493692.1 JAAXML020000856.1 397813 ~ 397894 (-)