G110958


Basic Information

Item Value
gene id G110958
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 806262 ~ 808340 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149407
cttttatttattacatttctttttaagttATGCAAATTAGTAAAGTAATAATTAcaatagaaacatctttataaaaCAGTAAACATTCCTCATGGTTTCACTTCTATTTTAACACCAAATATTCAGACCTAAACCCTACTTTACAGTCCTCGGTGCTGATCCAGAAAGAACATGGGCAGAATCTAGTAGAACCAAAGATCATTGATCAGGTGACGTCTCAGAACCAAAGACCATTGGTCAGGTGACGTCTCAGAACCAAAGATCATTGGTCAGGTGACGTCTCAGAACCAGAGATCATTGGTCAGGTGACGTCTCAGAACCAGAGATCATTGGTCAGGTGACGTCTCAGAACCAGAGATCATTGGTCAGGTGACGTCTCAGAACCAAAGATCATTGGTCAGGTGACGTCTCAGAACCAGAGATCATTGGTCAGGTGACGTCTCAGAACCAAAGATCATTGGTCAGGTGACGTCTCAGAACCAAAGATCATTGGTCAGGTGACATctcaggccctgtttacacaaatacacttgtgtgtgtgtgtgtctgtctgtgtctgtgtatctgtgtgtgtctgtgtgtgtgtgtctgtctgtgtgtgtgtttggtgtgtctgtgtgtgtgtgtgtctgtttggtgtgtgtgtgtgtgtgtgtgtgtatgtgtctgtgtgtgtgtgtgtgtctgtttggtgagtgcgtgtgtgtctggtgGCAGGACTTACACCAatagtgggcggggcttatagcactagtgggcggggcttatagcactagtgggcggggcttatccTCTATTCAGCAGGACAAAGACAGAACGCCAGCAGAGATACTGAACCCTCTGCGTCAGAAACACAAAGTGACTTTTCTTCATCGTTCACTCACCGAGACTTATagttaatatatattataaatattaataatattataatatatatatatatttatatataaggTGTAAAGATCCAATCACAGTGATTtaaatcagtggttcccaatcaCACATTAGACCCCCGACTATCATCCCAAAAACATaccaaaagtcaaaatatttcaagaaaaaaagctGAGTAAAGTTGATAATATTTCAAAAAACTTTGACTGCAGTAGGGTTACTATGTGGtatcatcagtgtgtgtgtataagtacttttactgcagtaaagtaaCGGATTACTTCTTCCACCTTTAGAGGAAACCGACCGTTGACATATTTAGTTTCATCTGTAACTTACAAACATTACGCAGCCAAAGTCACATCACTTAATATCAATGTCAATATTCGGACTTTTCTCGTTGAAATAATCAACTGTTTAGACTCAGGCTGATGTAAAAGTCCTGCGAGGCGCCTGTAGAGGGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149407 True 1360 lncRNA 0.41 5 806262 808340

Neighbor

gene id symbol gene type direction distance location
LOC120568738 LOC106676760 coding downstream 128528 676331 ~ 677734 (-)
inhbab NA coding downstream 167366 632687 ~ 638896 (-)
amph amph coding downstream 183132 593907 ~ 623130 (-)
LOC120568671 LOC103374724,LOC100692224,LOC102307095 coding downstream 260746 534708 ~ 545516 (-)
LOC120568477 NA coding downstream 274528 523269 ~ 531734 (-)
bfsp2 bfsp2 coding upstream 14712 823052 ~ 839766 (-)
ccr9a NA coding upstream 35468 843808 ~ 848645 (-)
LOC120567797 NA coding upstream 87167 895507 ~ 901196 (-)
LOC120567934 NA coding upstream 242557 1050897 ~ 1053660 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding upstream 312031 1120371 ~ 1136551 (-)
G110964 NA non-coding downstream 9673 755921 ~ 796589 (-)
G110946 NA non-coding downstream 38691 677818 ~ 767571 (-)
LOC120567842 NA non-coding downstream 257610 548335 ~ 548652 (-)
G110925 NA non-coding downstream 263077 497544 ~ 543185 (-)
G110898 NA non-coding downstream 409071 375313 ~ 397191 (-)
G110977 NA non-coding upstream 3106 811446 ~ 812017 (-)
G110978 NA non-coding upstream 5125 813465 ~ 822698 (-)
LOC120568673 NA non-coding upstream 8953 817293 ~ 818673 (-)
LOC120568722 NA non-coding upstream 10490 818830 ~ 822002 (-)
G111128 NA non-coding upstream 41721 850061 ~ 897711 (-)
G110957 NA other downstream 39962 754263 ~ 766300 (-)
G110889 LOC100692763,LOC108229211,LOC107383400 other downstream 423597 375712 ~ 382665 (-)
adhfe1 adhfe1 other downstream 504120 258075 ~ 302142 (-)
LOC120567755 NA other downstream 563163 235257 ~ 243099 (-)
G110840 NA other downstream 631397 57407 ~ 174865 (-)
G110988 NA other upstream 40842 849182 ~ 849492 (-)
G111136 NA other upstream 196731 1005071 ~ 1005925 (-)
G111133 NA other upstream 199893 1008233 ~ 1100670 (-)
G111134 NA other upstream 200554 1008894 ~ 1010100 (-)
LOC120568485 NA other upstream 291724 1100064 ~ 1114182 (-)

Expression


Co-expression Network