G110978


Basic Information

Item Value
gene id G110978
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 813465 ~ 822698 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149436
gatagaatggttatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcacattaaaggggtgatagaatgattatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatata
>TU149437
gaatgattatatagggtatttatcatgttaaaggagtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtattgaTCATGTTAAAGggctgatagaatgattatatagggtatttatcatgtcgGTTAAacatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcacattaaaggggtgatagaatgattatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatata
>TU149439
agaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcacattaaaggggtgatagaatgattatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatata
>TU149441
agaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcacattaaaggggtgatagaatgattatatagggtatttatcacgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatatagggtatttatcatgttaaaggggtgatagaatgattatata

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU149436 False 222 lncRNA 0.30 2 813465 822698
TU149437 True 463 lncRNA 0.29 2 813465 816853
TU149439 False 342 lncRNA 0.29 2 813465 814936
TU149441 False 260 lncRNA 0.29 2 813465 814936

Neighbor

gene id symbol gene type direction distance location
LOC120568738 LOC106676760 coding downstream 135731 676331 ~ 677734 (-)
inhbab NA coding downstream 174569 632687 ~ 638896 (-)
amph amph coding downstream 190335 593907 ~ 623130 (-)
LOC120568671 LOC103374724,LOC100692224,LOC102307095 coding downstream 267949 534708 ~ 545516 (-)
LOC120568477 NA coding downstream 281731 523269 ~ 531734 (-)
bfsp2 bfsp2 coding upstream 354 823052 ~ 839766 (-)
ccr9a NA coding upstream 21110 843808 ~ 848645 (-)
LOC120567797 NA coding upstream 72809 895507 ~ 901196 (-)
LOC120567934 NA coding upstream 228199 1050897 ~ 1053660 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding upstream 297673 1120371 ~ 1136551 (-)
G110977 NA non-coding downstream 1448 811446 ~ 812017 (-)
G110958 NA non-coding downstream 5125 806262 ~ 808340 (-)
G110964 NA non-coding downstream 16876 755921 ~ 796589 (-)
G110946 NA non-coding downstream 45894 677818 ~ 767571 (-)
LOC120567842 NA non-coding downstream 264813 548335 ~ 548652 (-)
G111128 NA non-coding upstream 27363 850061 ~ 897711 (-)
G111137 NA non-coding upstream 105225 927923 ~ 986063 (-)
G111147 NA non-coding upstream 157426 980124 ~ 980460 (-)
G111135 NA non-coding upstream 183385 1006083 ~ 1115960 (-)
G111156 NA non-coding upstream 201362 1024060 ~ 1198926 (-)
G110957 NA other downstream 47165 754263 ~ 766300 (-)
G110889 LOC100692763,LOC108229211,LOC107383400 other downstream 430800 375712 ~ 382665 (-)
adhfe1 adhfe1 other downstream 511323 258075 ~ 302142 (-)
LOC120567755 NA other downstream 570366 235257 ~ 243099 (-)
fastk fastk other downstream 668412 120850 ~ 145053 (-)
G110988 NA other upstream 26484 849182 ~ 849492 (-)
G111136 NA other upstream 182373 1005071 ~ 1005925 (-)
G111133 NA other upstream 185535 1008233 ~ 1100670 (-)
G111134 NA other upstream 186196 1008894 ~ 1010100 (-)
LOC120568485 NA other upstream 277366 1100064 ~ 1114182 (-)

Expression


Co-expression Network