si:ch1073-184j22.1 (LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261)


Basic Information

Item Value
gene id si:ch1073-184j22.1
gene name LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1322214 ~ 1342351 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149588
CGGAGAGGAAGAACACCGTCATTCGTCTGCAGTGTGAGCGACTGAAAGacaagagaggaaaaagaggaggaaaaagaggaggaggcagcgagccacacagagagaaactttgctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacagactctctgcTGGAAAGAAAGCTCACACACGTCTGTGTGTTTGACAACGGAAAGTTTCCTGAAACCTTTCCTAGAAAACTCTTTCCTCCGACTTTTATTCAGCTGATCGCAGAGGAGCAAACCTACAGCAGTGCATGATGGGAACGTCTTAAGTCCACACGGACCCCTGAAGACCTGGACCCCTGAAGACCTGAACCCCTTCGTGTCCTGCAGCGGTGGAAgagACAGGCAGCATGCCGGCCAGGTCGTCCCAGGGACGGAGCTCTCCGGCTGGGGCAGGAGggcggctgctgctgcctctgctCCTGggtctgatgatgatgacgatgaagGTGATAGCGGCGGCGAGCGTCGAGGAGGCGGAGAGCGGGGAGAGCGAGGAGATCCTGGAGGAGGACGATGAGGCCGTCAGCGCGGAGATGCTGGTAAGAAATCTGCACCGGAACTCCAGTTCAACCAACGCCTTCTCACCAACGGGTTTGTATGACATCGTACGAAAGGCCGGTCGTGTGGCTCTGTATCAGAGGCCGTTacagtatttgtatttgtatttattataaggatccccattagctgacgccTAGACGACCAGCTAGTTTAGTGTAGCCAATAAAAAGTGAGcgttggtttgtttgtgtttagttAAAAGTAGTAATAATTAGTAAGGTTTTGTTTAAgtaaataagtttatttgattggaacaatgcacattaatcaacatttctgtaaatggtCCAGTgctagccagtcggctaattttcaactgtagtcctagtatgcatgtctttatgatGGGAAGAAAACAGAGCACCCAGACAAAAcccatgcaaactccacacagaaagaccCAGAACAACGTGGACTTGAACCCAGAACCATCTTGCTGTGAGTTAGAAGTgataaccactgagccaccatgCTGTTGCTATCTTCTTTGCATAGTTTAGTGCAGGCatgcactgaatccaggatTCAGATTcagctgaatattgggctttttgacggggttcggtttcttCCAAACCTTAGAATATATTCCCAgtgaaccgaaccctacgcttgcactcggcggactacgctggtcgccgtaacGACGGCGCAGttgattacaggaaggtgtttatgtaggtggagcgttcaatgcagtaggctgtgagaaagtggacatggaactggtgagcagaacaagttgttgtttggcagtactttcagtcaaaagaaggccattcaagtccagctacatgttcaatctgttcaacgctgattggtctggtggtggcgaggaccctaaactatacacaacatggccgctgttacaacatctggccTGAAAcgtgaaagaatacgagttgtgcacgaaggaatctccagacagcagccagaatgcagcaacttcaggtacggcaaaggaaggccagtccctgtttacttcattcatgtgtttactgtggtcatggactgaggatgggaggaggagtcagcacaatctcaaccaggAGATTCAGGATTtggcccaaaaatctggatttggtgcatccatAGTTTAgtggtttaaaggtcccatgacatgctgctttttggatgcttttatataggccttagtggtcccctaatactgtatctgaagtcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatataggccttagtggtcccctaatactgtatctgaagtctcttttatataggccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtcttttttatatagaccttagtggtcccctaatactgtatcttatatagctccttatgacctcataaggagacgattcctgattggcccatctgagctttcattttctcaaaggcagagcaggatacccaggactcggtttacacctatcaccatttctagccactagggggccataggcaggctgggggaactcatattaatgttaaaaaacctcataaagtggaattttcatgccatgggacctttaattctTATTTTTAAAGTGTCATCACATCCATAGGCTCTTTCTTTTCGTTGTAGTTTGTGCACCTGTGATTCTGTTAATCCCTTTTTTAAACTCTTATGTTAATTAATAACTTTAATGTATCAACAACACCTGTCATTATGTTGCTTCCTTAACGAGCTGGCTCCTAACATGCAGAAATGTGGCGTTTTAAACTTTTGAAGCTATACTTTATTGTGGTTGTTGTCTTCCAGGAGCCACTGCAGATCTGTCCAGTGTCTCCGACGCTTTTCCCACATTtttgaagttattttttttttccgagGTTTGTGTCACATTTTTTGACATCTCGTTCTGCAGAAACGTGGCGTTTTAAACATTTGAACCTACTTTGTTGTGGTCGCTGTCCTCGGGTCTGTCCAGATTGTCGCCAATGCTTTTTTTAATGACGTTTTAAGTCAGTCTCTTTTTCCGATATTTACTGTAtgcaacattttgaaatattttaagaCAAATCTTGTTCTGCAGAAATGTGGCGTATTAAACATTTGAGCCTATACTTGGTGTCTTCCAGGAGCCGCTGTCCTCGGATCTGTCCAGAGTAACTCCTCTCAACTCCTGGCTGATCTTCAGAAGAAACTCCAACAAGGGGGACAACCGGAGAAACAAAGGATCCAGGAGAACCTCAAAGCATGGTCTTCCCGGGCCTCCTGGCCCTCCGGGCCCCCAGGGGCCTCCAGGGCCCCCTGCCCCCCTcctgccccaacaacagcagCTGATCCAGGATCTGCAGCTCAAACTGAGAGAGCTGGCAGCAGGAGgagtgtgtttcctgtgtgatcGGCCTCCTCGCGTCTCCACCTCCTTCCTCAGGCGCCTCCCGGCAGACGCCATCATCCCTCGCCGCAGCCTGCTGGAGCTGCAGCCATTCAGCCagCCCTCCGACTCAGAGCGGAGCCTCCAGAGAGGTCAGAGCTTCAACGCCAGCACTGGGCGCTACGCCGCAGCTGTATCCGGCTTCTACCAGCTCACCGCCAGCCTCCTCATAGaatcaGGAGACAGAGTCCAGGTGAGACTGAGAGACAGCGTGAGAGCAGCAATCTGCATCGAGTCGCTCTGCCAGAGCAACCTcTCTGTGGAGTCTGTGATGGGCGTGGCAGCAGCGGGAGGAACATTCAGCATCCTACTGACAGGAACGCTCTATCTACAGGCTGGAGAGtacgtgtctgtgtttgtggacAACGCCACCGGGTCGACCATCAGGGTCCTGCAGGACTCTCTGTTCTCTGGGATCCTGCTGGGAGTCTGAACACTTCGGACCACGAGCAGCCACGTGGTTCCACAGCAACCGACAGGGctgcacatcatcatcatcggaTATCCATACGCTTCACAAAATAGTGCCGTCGTTTATGATTTCCTGTCAGAGGCTAAATGATCTTCTGCAGAGCTGAACTCTGGAGCATCATCTAGTGGACTTTATAAGAACTGGGACTCACCTTCTTCTCGGGACGACATTTATTTAACTGATCTTCGAACGGCTGATgatattttcatatttcatacGTTATCGAATCATCATATTTAAGCAGTTTCATGCCAAAGAGTTTTCCTTTCAGGCCATCAAAACCCTGAAACAGAAGACATTTCTTAAAGTCAAACTATAAAGAATAATCACCTGATCCTGCTCGTCagactttaatattaatatttattctCT
>XM_039816703.1
CTGAGCACACGGAGAGAGGGATCAGAGACGGAGAGGAAGAACACCGTCATTCGTCTGCAGTGTGAGCGACTGAAAGacaagagaggaaaaagaggaggaaaaagaggaggaggcagcgagccacacagagagaaactttgctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacagactctctgcTGGAAAGAAAGCTCACACACGTCTGTGTGTTTGACAACGGAAAGTTTCCTGAAACCTTTCCTAGAAAACTCTTTCCTCCGACTTTTATTCAGCTGATCGCAGAGGAGCAAACCTACAGCAGTGCATGATGGGAACGTCTTAAGTCCACACGGACCCCTGAAGACCTGGACCCCTGAAGACCTGAACCCCTTCGTGTCCTGCAGCGGTGGAAgagACAGGCAGCATGCCGGCCAGGTCGTCCCAGGGACGGAGCTCTCCGGCTGGGGCAGGAGggcggctgctgctgcctctgctCCTGggtctgatgatgatgacgatgaagGTGATAGCGGCGGCGAGCGTCGAGGAGGCGGAGAGCGGGGAGAGCGAGGAGATCCTGGAGGAGGACGATGAGGCCGTCAGCGCGGAGATGCTGGAGCCGCTGTCCTCGGATCTGTCCAGAGTAACTCCTCTCAACTCCTGGCTGATCTTCAGAAGAAACTCCAACAAGGGGGACAACCGGAGAAACAAAGGATCCAGGAGAACCTCAAAGCATGGTCTTCCCGGGCCTCCTGGCCCTCCGGGCCCCCAGGGGCCTCCAGGGCCCCCTGCCCCCCTcctgccccaacaacagcagCTGATCCAGGATCTGCAGCTCAAACTGAGAGAGCTGGCAGCAGGAGgagtgtgtttcctgtgtgatcGGCCTCCTCGCGTCTCCACCTCCTTCCTCAGGCGCCTCCCGGCAGACGCCATCATCCCTCGCCGCAGCCTGCTGGAGCTGCAGCCATTCAGCCagCCCTCCGACTCAGAGCGGAGCCTCCAGAGAGGTCAGAGCTTCAACGCCAGCACTGGGCGCTACGCCGCAGCTGTATCCGGCTTCTACCAGCTCACCGCCAGCCTCCTCATAGaatcaGGAGACAGAGTCCAGGTGAGACTGAGAGACAGCGTGAGAGCAGCAATCTGCATCGAGTCGCTCTGCCAGAGCAACCTcTCTGTGGAGTCTGTGATGGGCGTGGCAGCAGCGGGAGGAACATTCAGCATCCTACTGACAGGAACGCTCTATCTACAGGCTGGAGAGtacgtgtctgtgtttgtggacAACGCCACCGGGTCGACCATCAGGGTCCTGCAGGACTCTCTGTTCTCTGGGATCCTGCTGGGAGTCTGAACACTTCGGACCACGAGCAGCCACGTGGTTCCACAGCAACCGACAGGGctgcacatcatcatcatcggaTATCCATACGCTTCACAAAATAGTGCCGTCGTTTATGATTTCCTGTCAGAGGCTAAATGATCTTCTGCAGAGCTGAACTCTGGAGCATCATCTAGTGGACTTTATAAGAACTGGGACTCACCTTCTTCTCGGGACGACATTTATTTAACTGATCTTCGAACGGCTGATgatattttcatatttcatacGTTATCGAATCATCATATTTAAGCAGTTTCATGCCAAAGAGTTTTCCTTTCAGGCCATCAAAACCCTGAAACAGAAGACATTTCTTAAAGTCAAACTATAAAGAATAATCACCTGATCCTGCTCGTCagactttaatattaatatttattctCTGGATGTGATAAACAAGTTGTGAATGATTCTGATATTAAAACCTTGTCTTGTTTA

Function

NR:

description
erythroferrone-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149588 True 3950 TUCP 0.47 8 1322242 1342297
XM_039816703.1 False 1849 mRNA 0.54 9 1322214 1342351

Neighbor

gene id symbol gene type direction distance location
pex5lb LOC102798103,LOC101487249 coding upstream 34415 1226050 ~ 1287799 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding upstream 107738 1208168 ~ 1214476 (+)
wdr33 wdr33 coding upstream 121633 1152120 ~ 1200581 (+)
LOC120568483 NA coding upstream 258815 1040826 ~ 1063399 (+)
LOC120567933 LOC106676760 coding upstream 282906 1035370 ~ 1039308 (+)
LOC120567879 NA coding downstream 101812 1444163 ~ 1444665 (+)
LOC120567883 NA coding downstream 108038 1450389 ~ 1459918 (+)
LOC120567882 NA coding downstream 121751 1464102 ~ 1464596 (+)
LOC120568500 hnrnpab,LOC100707314 coding downstream 546772 1889123 ~ 1890298 (+)
LOC120568501 NA coding downstream 555704 1898055 ~ 1906798 (+)
G111074 NA non-coding upstream 90639 1230809 ~ 1231575 (+)
G111060 NA non-coding upstream 115708 1205789 ~ 1206506 (+)
G111052 NA non-coding upstream 120716 1141040 ~ 1201498 (+)
G111092 NA non-coding downstream 41589 1383940 ~ 1384169 (+)
G111093 NA non-coding downstream 42853 1385204 ~ 1385497 (+)
G111096 NA non-coding downstream 48929 1391280 ~ 1391674 (+)
G111101 NA non-coding downstream 69578 1411929 ~ 1469023 (+)
LOC120567880 NA non-coding downstream 174702 1517053 ~ 1517513 (+)
cdyl cdyl other upstream 229451 1020863 ~ 1092763 (+)
si:dkey-154p10.3 NA other upstream 319660 982515 ~ 1002554 (+)
dnajc1 dnajc1,LOC106533614 other upstream 565716 737805 ~ 756498 (+)
G110789 NA other upstream 706218 612113 ~ 615996 (+)
G110768 NA other upstream 797063 523450 ~ 525151 (+)
G111106 NA other downstream 98302 1440653 ~ 1441147 (+)
LOC120568494 NA other downstream 109523 1451874 ~ 1683286 (+)
G111112 NA other downstream 162258 1504609 ~ 1505015 (+)
LOC120568489 NA other downstream 210060 1552411 ~ 1553341 (+)
LOC120567875 NA other downstream 218328 1560679 ~ 1561168 (+)

Expression


Co-expression Network