G111101


Basic Information

Item Value
gene id G111101
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1411929 ~ 1469023 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149623
AGGACACACAGTTTATTCTCTCACCAACTTCTGGGAAACCATCCCACAACACACGGTAcagatgatgaggatgatgaggaggaggagactgtgtgtgtgtgtgtgtgtgtgtataaatatatctgtctttgtgtgggtgtgtgtgtatgtctgtctttgtgtgcgtctttgtgtatatctgtgtgtgtgtgtgtgtgtgtgtgcgcatgtgactggtgtgtgtgtctgtctttgtgtctttgtgtgtgtctttgtgggtgtgtgtgtgtcattgtgtatgtatttgtctttgtgtgtgtgtgtgagagactgtgtgtgtgtgtgtatatatatctgtgtgtgtgcgcgtgtgtgtgtgtgagactgtgtgtatgtgtctgtgtgtgtgtgtgtgtgtataaatatatctgtctgtgtgggtgtgtgtgtatgtctgtctttgtgtgcgtctttgtgtatatctgtgtgtgtgtgtgtgtctctgtgtgcgtgtgactgtggtgtgtgtgtgtctgtctttgtgtgtgtgtgtgtgtgtatgtttgtgggtgtgttctttgtgtatgtatttgtctttgtgtgtgtgtgagactgtgtgtgtgtatatatatctgtgtgtgtgtgcgcgtgtgtgtgactgtgtgtatgtgtctttgtgtgtgtgtgtgagacaccgtgtgtgactgtgtgtgtgtgtgtttgtgagtgatgaagatgatgatgacgaaCACTCACATTGTTTGCAGGTTTTCAGTCAAATATCaggattttcaaaataaaatcacattaataaaaataaattaaaatgtaccACACGTGTGAATAAAAACCTGAGTTGAGATCAGttcatgcaacaacaaaacaagagTTCATCGTGATTCATAGACATTaacctttaataataataataataataataatatatgatgTAACAGATCAAAGAgggttttaaaatataaaaccatATTTGTTATTAATAAAGGAATCAACATGTTAGTCGATACGTAccgattattttctggatgaatggatcgGTGTTTGGTCTCTAATGGCGTGTTCATCTCTAtgggagcagccgtgcaatgcatgctgggagcaTCGCGGGGAGTTTGGAGAAGTGGGGCGTTGAGTCGccagctcctcatttgcataaagttgaatccagccaactttatgcaaatgagaagCTGACAAAACGCTTTTAAACTGACCGTTAAGCAACTGCACgacctatttctctcttcaaatgttttcagaaacacgtttcggtgaactatgtTCATAAAATAAGAGATCGGATTCTAAACGAGCCGCCATgtgggagcagccagacccgcgtgacacgttcgtccaatcagctgcagccattgcggttgtaggagggcggagcctgttttctttgcttgtcattggtcagtgaagagaaactggaGGCGAGCCCACTAGCGTGTAAGGctctcctgcacactggctgcgtggtgtgagcgtgtcagctgcgtggcgtgtccgtttttatttgggctaccatggtaacaggttagagcgtgcacgctgcctgcctgacacgcacgtctcaggaaACACGTgcgtgctagaaatagaacagacgcctatttttcatgcTATATGCCAGTGTGTTGGAAGcgcaaaatacatttaatagatgacatgttgatgtttgaaagtctcgaggttttgatataaatgcaaatatataaatgtcatttaaaaataataattatggaTTTTCAAATAGGTCACCAGtgaatccagaaggaaatattctggagcctatttagccgtcaatactgccgacgttgtctttgctgtaatcagatcagaatatatttatgtttatgtttatgggaaacatccatgtgtccagacaagactagcagcagcagcagcgccgcgtcagacacctttctggtggggAAAGACGTAGAgaacgccacgcagctgaaacgccacgctcacgccacgcagccggtGTGCAGGAGCCTTAATGCTGGGAAGCGTGGCGATCCCGTCCGTGAAAACAGCGCGTACATGGACACGCACCGCGAGTTTGATCGTATTTGGCTCATTTGTGTTTCATCTCATTACTCAGGAACCCACCGGTATAGAGCTGTAACAACCTCTCTTTCAGTCATCATATAATATGATGACCTTTATATAATGTCATATCTCAcgtcttttaaattaaactacagaTACACAGGAAATAACTTGTCTGTCAGTGAGCGTGCTGGCAGTCTGGTTTGGAGAGTTTGTGTTGTTATTTCCGGTTTCCCTCCCCtgcgtcctctgataacagctgacagtagactgatgttacacagctctgtgacagctccaaaaaacaacaataatccCAGAGGGAAAACTTtccctgggtgtgtgtgtgtgtgtgtatatatatgtgtgtgtgtctgtctgtctgtctgtctgtctgggtgtgtgtgtctgtgtgtatctgggtctgttggtctgtctgtgtgtgtgtgtgtctgtgtgtgtgtgcctgactGACTGCGTGTCCCGCTGTAGACACAGCTGAGAAGGCCAGACCCATGaacctgggtgttttattttgaaatgtgttttattttgtaaagtctCTGGCTGTGCTGTGGctttcctgtatgtgattacccGCCTGGCTTGACCCGTTCGCCTGCGGCTCGCGCAAGAAATAGAAAAGACGCCGAAAAGATTGCTGCAGCGGCGGGTCAGATAACACGGGCgccaaaataaaaatagctcAACCTCTACAGCACTTCGTGGCTATTGGCGGTGCTTCCTCTACTTCTCTGATTCTTGAAGAAGTCCTTTTTAAAGTTAAGTTATGTCGTGTTCTTTAAAATCATTTATCAGGACACCTAAAACGTGTCTGAAGAGCTTGTTTTATAATCTAGTGATAAAGCAGACGCTCTGAAACCAGAACGCGCATTTGAAGGATTTTTATGTTTTCTAGTTGTTTCCACTGATTACGAGGCCACGCGAAACAAGTGTAATGAAGCATGATAATATTTGGAAACCTCCAACAGAAGAGTGTTGAGAGCCTATGAttgaaataacaataaataatataaagctGAAAGTGGATCAGAGGAACTGAAGGCACGTCAAACTGTGGAAGAAAAGTCAAATAAGAACAATAAAAAGGTAAGAGGACGAGACGGGACGTCCTgttcagttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcagttcaCTTCCAGCCCGTTAAGACAACTTGGTTTGGAACAGAGAGACCCCGTTGAGACACGATGTTAGTCGTGAGTATTTATGGACCGTTTTCGCGTATCGCATCGCTCGGCAACCATGTGGTTTGTCTTTTGTGGCGTTGCCGTAGCTAGCTGTCAAAGACGGCGGCCGTTCGGCACGTGCGCAACTCACATGGTGTCTTGACGGACCGGTTTACAATGGCGTTAACAGTGGCGTGTTTCCATCATCCTGCTTTCGCTCTCACTGTTCCAAGAAGATGGTCTCATGTTTCTCGTCTCCAGAAGTAACGTTGAGTTCCTAAATGGGACAAATGTTTGTCGCAGGAGAGGTTTCCTTTTGAGAGGCAACCGTGTCCCCTTCTCTTTGATTTAATACCCTCAAATTAGTCAAAAGGTCCAGTTCTGGCCTCTTAAAAAACAATACTGTACCATTAAGGGAACATATTCAAAAGTGCAGTGGTAAGAACAGAAGAGTTCTTGTCTCGTACCTCCACGGTTGAGTGTGTGTAACAGACAGCGGTGAGATTTGGCAGCCGGGTAGGTTTAGGTTCTGAGACGAGGCGGGTTAGGGGTTTTTAAGCGAGTCACCAGTAAAAAGAGCGGGACAGGAAGTTGGTGGCGGTGCCCAGCCAGCTGCTCCCGTCCTGGCCCGATCCCACGCGGGTCACCGCCTTGTCGGGCTCCAGAGACGGACTCTCTTCCTCCGGCAGGTAGTCCGGCAGCGCCGCGTTCTGCTCCACCGTCACCGAACCGTCCGTCGCCAGCGGGATCAAAACCTGGAGACGACAACCACAGTTTAAACCAGGACTAGGGACTAGGAGGGACTAGGAGGGACTAGGGACTTCTAGACTACCAAAATATTAGCAGACggaatggatcaaattctgacaGTGAGAtgagtagggctgtgctcgattgaagaaattgtaacgactaatcgattagttgatttaatcgacagatctgtaaatctgagtttctccacaaagagtcctgctaaaagcaccactttaattcttgtgtttaccagagatgtgctcgtaggtttcttggaaataagtcattcagcatgaaaac
>TU149625
AGGACACACAGTTTATTCTCTCACCAACTTCTGGGAAACCATCCCACAACACACGGTAcagatgatgaggatgatgaggaggaggagactgtgtgtgtgtgtgtgtgtgtgtataaatatatctgtctgtgtgggtgtgtgtgtatgtctgtctttgtgtgcgtctttgtgtatatctgtgtgtgtgtgtgtgtctctgtgtgcgtgtgactgtggtgtgtgtgtgtctgtctttgtgtgtgtgtgtgtgtgtatgtttgtgggtgtgttctttgtgtatgtatttgtctttgtgtgtgtgtgagactgtgtgtgtgtatatatatctgtgtgtgtgtgcgcgtgtgtgtgactgtgtgtatgtgtctttgtgtgtgtgtgtgagacaccgtgtgtgactgtgtgtgtgtgtgtgtgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149623 True 4419 lncRNA 0.45 2 1411929 1416565
TU149625 False 517 lncRNA 0.46 3 1411929 1469023

Neighbor

gene id symbol gene type direction distance location
pex5lb LOC102798103,LOC101487249 coding upstream 124130 1226050 ~ 1287799 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding upstream 197453 1208168 ~ 1214476 (+)
wdr33 wdr33 coding upstream 211348 1152120 ~ 1200581 (+)
LOC120568483 NA coding upstream 348530 1040826 ~ 1063399 (+)
LOC120567933 LOC106676760 coding upstream 372621 1035370 ~ 1039308 (+)
LOC120568500 hnrnpab,LOC100707314 coding downstream 420100 1889123 ~ 1890298 (+)
LOC120568501 NA coding downstream 429032 1898055 ~ 1906798 (+)
LOC120568513 NA coding downstream 685912 2154935 ~ 2158565 (+)
LOC120567901 NA coding downstream 689773 2158796 ~ 2161477 (+)
LOC120567900 NA coding downstream 710086 2179109 ~ 2179603 (+)
G111096 NA non-coding upstream 20255 1391280 ~ 1391674 (+)
G111093 NA non-coding upstream 26432 1385204 ~ 1385497 (+)
G111092 NA non-coding upstream 27760 1383940 ~ 1384169 (+)
G111074 NA non-coding upstream 180354 1230809 ~ 1231575 (+)
G111060 NA non-coding upstream 205423 1205789 ~ 1206506 (+)
LOC120567880 NA non-coding downstream 48030 1517053 ~ 1517513 (+)
G111125 NA non-coding downstream 123759 1592782 ~ 1597579 (+)
LOC120567895 NA non-coding downstream 297472 1766495 ~ 1767066 (+)
LOC120567894 NA non-coding downstream 377473 1846496 ~ 1853159 (+)
LOC120567893 NA non-coding downstream 388136 1857159 ~ 1857661 (+)
si:ch1073-184j22.1 LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261 other upstream 69578 1322214 ~ 1342351 (+)
G111076 NA other upstream 75738 1242649 ~ 1336191 (+)
cdyl cdyl other upstream 319166 1020863 ~ 1092763 (+)
si:dkey-154p10.3 NA other upstream 409375 982515 ~ 1002554 (+)
dnajc1 dnajc1,LOC106533614 other upstream 655431 737805 ~ 756498 (+)
G111112 NA other downstream 35586 1504609 ~ 1505015 (+)
LOC120568489 NA other downstream 83388 1552411 ~ 1553341 (+)
LOC120567875 NA other downstream 91656 1560679 ~ 1561168 (+)
LOC120567873 NA other downstream 104115 1573138 ~ 1573720 (+)
LOC120568490 NA other downstream 111604 1580627 ~ 1582684 (+)

Expression


Co-expression Network