G111106


Basic Information

Item Value
gene id G111106
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1440653 ~ 1441147 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149630
GGCCCAGATCCATCAGAGTAtcaatgctcttcctctctctcctcccctctcactGCAGACATGAAACACTGGCTGACTAACATCCTGATTCTGACTCTCTGGCTAGAGTGTAAAGGAGAAGACAGTGTGACCCAGCCAACAAGAGATGTCATTACTACTGAAGGAGAGACAGTTACTCTTAACTGTACATTTGAGACCAGTGACACATATCCCTATTTGTTCTGGTACAAACAAGAAGTCAATGATTACCCAAAGATGCTGCTGCGACGTGTAAAAACAGATAATTctaaagagcaagagagagttGATGCTACAATCAAGGAAaagtcctttcctctgaagatccagaagcttcagctgtctgactctgctgtgtactactgtgctctgaggcccacagtgacagga

Function

GO:

id name namespace
GO:0030163 protein catabolic process biological_process
GO:1901565 organonitrogen compound catabolic process biological_process
GO:0009057 macromolecule catabolic process biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0046686 response to cadmium ion biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process
GO:0010035 response to inorganic substance biological_process
GO:0010038 response to metal ion biological_process

KEGG:

id description
ko04612 Antigen processing and presentation
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
TU149630 True 408 TUCP 0.45 2 1440653 1441147

Neighbor

gene id symbol gene type direction distance location
pex5lb LOC102798103,LOC101487249 coding upstream 152854 1226050 ~ 1287799 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding upstream 226177 1208168 ~ 1214476 (+)
wdr33 wdr33 coding upstream 240072 1152120 ~ 1200581 (+)
LOC120568483 NA coding upstream 377254 1040826 ~ 1063399 (+)
LOC120567933 LOC106676760 coding upstream 401345 1035370 ~ 1039308 (+)
LOC120567879 NA coding downstream 3016 1444163 ~ 1444665 (+)
LOC120567883 NA coding downstream 9242 1450389 ~ 1459918 (+)
LOC120567882 NA coding downstream 22955 1464102 ~ 1464596 (+)
LOC120568500 hnrnpab,LOC100707314 coding downstream 447976 1889123 ~ 1890298 (+)
LOC120568501 NA coding downstream 456908 1898055 ~ 1906798 (+)
G111096 NA non-coding upstream 48979 1391280 ~ 1391674 (+)
G111093 NA non-coding upstream 55156 1385204 ~ 1385497 (+)
G111092 NA non-coding upstream 56484 1383940 ~ 1384169 (+)
G111074 NA non-coding upstream 209078 1230809 ~ 1231575 (+)
G111060 NA non-coding upstream 234147 1205789 ~ 1206506 (+)
LOC120567880 NA non-coding downstream 75906 1517053 ~ 1517513 (+)
G111125 NA non-coding downstream 151635 1592782 ~ 1597579 (+)
LOC120567895 NA non-coding downstream 325348 1766495 ~ 1767066 (+)
LOC120567894 NA non-coding downstream 405349 1846496 ~ 1853159 (+)
LOC120567893 NA non-coding downstream 416012 1857159 ~ 1857661 (+)
si:ch1073-184j22.1 LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261 other upstream 98302 1322214 ~ 1342351 (+)
G111076 NA other upstream 104462 1242649 ~ 1336191 (+)
cdyl cdyl other upstream 347890 1020863 ~ 1092763 (+)
si:dkey-154p10.3 NA other upstream 438099 982515 ~ 1002554 (+)
dnajc1 dnajc1,LOC106533614 other upstream 684155 737805 ~ 756498 (+)
LOC120568494 NA other downstream 10727 1451874 ~ 1683286 (+)
G111112 NA other downstream 63462 1504609 ~ 1505015 (+)
LOC120568489 NA other downstream 111264 1552411 ~ 1553341 (+)
LOC120567875 NA other downstream 119532 1560679 ~ 1561168 (+)
LOC120567873 NA other downstream 131991 1573138 ~ 1573720 (+)

Expression


Co-expression Network