LOC120568494


Basic Information

Item Value
gene id LOC120568494
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1451874 ~ 1683286 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149632
atcaacattacctttattcaacttgctgtcactgcagcattgtaTGTTTTCTCTGATGTTTCTCTCCATTCTCACAGGTATGTTAGATTATGCAGCATGGAAAAGTTATGCTTCAATAATATCTGCATGTGAATCATTTGAGCATTGTACAACAAgaaataacagagttatctcttcctttaggtgtcagctgtgaagaactcactccagtccagaaagaagagaacagtttagaaggcagctctgttactctgtcctgtaGATACTCCAAAGGTTCTGCtgattatttcttctggtatCGACAATATTCGGGAAAGCCACCAGAGTTC
>XM_039816053.1
CATGTGAATCATTTGAGCATTGTACAACAAgaaataacagagttatctcttcctttaggtgtcagctgtgaagaactcactccagtccagaaagaagagaacagtttagaaggcagctctgttactctgtcctgtaGATACTCCAAAGGTTCTGCtgattatttcttctggtatCGACAATATTCGGGAAAGCCACCAGAGTTCCTCATCTCTCATCTGGAATCAGGAGAAATAATGCAAAATACAACCTCTGGACTGTCTGTTTCCATCATGAACAATTCTCCTCCTACTGACTGCAGAGGTGGCTTCATCACAGAGAACTGTTTGATTCCAGCTGTGAACATCAGACCAAACAACTCACAAAACTTCTTCATCCTGAACCTtcaaaaacagcatttcaccTCTGCAGACATGGAAACACTCACTGTAATTCTCTTCTGCTTCACTCTCATAGGTAACACGATGGAAGATGATATTACTGCCAGCAGTGCTGAAATGTTTTCATCAGAGGGCCGTAGTGTTACTCTGTCCTGTACCTATTCAGTTAAAGCTGATAATCTCCAGTGGTATCGACAGGATCCTGGATCAGCTACTAAGTTCCTTCTCCTGATCACTGATACAAAAACCACCTTCAGTAAAGGATGCAAAACCCCTCAACCTCGACTGAAAGCTAAACTGAATGATGAGAGAAATGAAATTGATCTGCAGATCTCCTCTGCTGAAGTaactgactctgctgtgtactactgtgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149632 False 329 lncRNA 0.39 2 1451874 1675945
XM_039816053.1 True 753 mRNA 0.42 4 1675742 1683286

Neighbor

gene id symbol gene type direction distance location
LOC120567879 NA coding upstream 7209 1444163 ~ 1444665 (+)
pex5lb LOC102798103,LOC101487249 coding upstream 164075 1226050 ~ 1287799 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding upstream 237398 1208168 ~ 1214476 (+)
wdr33 wdr33 coding upstream 251293 1152120 ~ 1200581 (+)
LOC120568483 NA coding upstream 388475 1040826 ~ 1063399 (+)
LOC120568500 hnrnpab,LOC100707314 coding downstream 205837 1889123 ~ 1890298 (+)
LOC120568501 NA coding downstream 214769 1898055 ~ 1906798 (+)
LOC120568513 NA coding downstream 471649 2154935 ~ 2158565 (+)
LOC120567901 NA coding downstream 475510 2158796 ~ 2161477 (+)
LOC120567900 NA coding downstream 495823 2179109 ~ 2179603 (+)
G111096 NA non-coding upstream 60200 1391280 ~ 1391674 (+)
G111093 NA non-coding upstream 66377 1385204 ~ 1385497 (+)
G111092 NA non-coding upstream 67705 1383940 ~ 1384169 (+)
G111074 NA non-coding upstream 220299 1230809 ~ 1231575 (+)
G111060 NA non-coding upstream 245368 1205789 ~ 1206506 (+)
LOC120567895 NA non-coding downstream 83209 1766495 ~ 1767066 (+)
LOC120567894 NA non-coding downstream 163210 1846496 ~ 1853159 (+)
LOC120567893 NA non-coding downstream 173873 1857159 ~ 1857661 (+)
LOC120567891 NA non-coding downstream 186899 1870185 ~ 1870674 (+)
LOC120567888 NA non-coding downstream 196452 1879738 ~ 1880285 (+)
G111106 NA other upstream 10727 1440653 ~ 1441147 (+)
si:ch1073-184j22.1 LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261 other upstream 109523 1322214 ~ 1342351 (+)
G111076 NA other upstream 115683 1242649 ~ 1336191 (+)
cdyl cdyl other upstream 359111 1020863 ~ 1092763 (+)
si:dkey-154p10.3 NA other upstream 449320 982515 ~ 1002554 (+)
LOC120567896 NA other downstream 26036 1709322 ~ 1935777 (+)
LOC120568495 NA other downstream 38173 1721459 ~ 1722291 (+)
LOC120568507 NA other downstream 323514 2006800 ~ 2015872 (+)
LOC120568512 NA other downstream 361434 2044720 ~ 2049498 (+)
LOC120567898 NA other downstream 406943 2090229 ~ 2090739 (+)

Expression


Co-expression Network