LOC120568489


Basic Information

Item Value
gene id LOC120568489
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1552411 ~ 1553341 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149645
CTCAGAGTTACTCCACACTGCAGATATGAAGCCTCTGTTCATCTCAGTGTTGCTGGCTGCTATGAGCCTTGAATGCGGAGCACAAAAAGACAACGTGCTGCAACCAGAAGGAGATGTGACTGCTACTGAAGGAGAGGCAGTAACACTTGGCTGTCAATATAACAGCAGTGCAACCAATTCTTATCTCTACTGGTACAAACAGGATGGAAACAACAGCCCCAAATTCATTCTGAGCCGCTTTACGTTTGGCTCTGGGAAAACAGTTGACGAGGAGAAATATTCATCCACACTGAATTCCAGCTTAAGATCAGTTCCTCTGAAGATCC
>unassigned_transcript_483
AGTTACTCCACACTGCAGATATGAAGCCTCTGTTCATCTCAGTGTTGCTGGCTGCTATGAGCCTTGAATGCGGAGCACAAAAAGACAACGTGCTGCAACCAGAAGGAGATGTGACTGCTACTGAAGGAGAGGCAGTAACACTTGGCTGTCAATATAACAGCAGTGCAACCAATTCTTATCTCTACTGGTACAAACAGGATGGAAACAACAGCCCCAAATTCATTCTGAGCCGCTTTACGTTTGGCTCTGGGAAAACAGTTGACGAGGAGAAATATTCATCCACACTGAATTCCAGCTTAAGATCAGTTCCTCTGAAGATCCAGAATcttcagctgtctgactctgccgtgtactaTTATAACAGGTGTCAGCTCTGA

Function

GO: NA

KEGG:

id description
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection

RNA

RNA id representative length rna type GC content exon number start site end site
TU149645 False 326 TUCP 0.46 2 1552411 1552827
unassigned_transcript_483 True 377 V_gene_segment 0.45 4 1552416 1553341

Neighbor

gene id symbol gene type direction distance location
LOC120567882 NA coding upstream 87815 1464102 ~ 1464596 (+)
LOC120567883 NA coding upstream 92493 1450389 ~ 1459918 (+)
LOC120567879 NA coding upstream 107746 1444163 ~ 1444665 (+)
pex5lb LOC102798103,LOC101487249 coding upstream 264612 1226050 ~ 1287799 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding upstream 337935 1208168 ~ 1214476 (+)
LOC120568500 hnrnpab,LOC100707314 coding downstream 335782 1889123 ~ 1890298 (+)
LOC120568501 NA coding downstream 344714 1898055 ~ 1906798 (+)
LOC120568513 NA coding downstream 601594 2154935 ~ 2158565 (+)
LOC120567901 NA coding downstream 605455 2158796 ~ 2161477 (+)
LOC120567900 NA coding downstream 625768 2179109 ~ 2179603 (+)
LOC120567880 NA non-coding upstream 34898 1517053 ~ 1517513 (+)
G111101 NA non-coding upstream 83388 1411929 ~ 1469023 (+)
G111096 NA non-coding upstream 160737 1391280 ~ 1391674 (+)
G111093 NA non-coding upstream 166914 1385204 ~ 1385497 (+)
G111092 NA non-coding upstream 168242 1383940 ~ 1384169 (+)
G111125 NA non-coding downstream 39441 1592782 ~ 1597579 (+)
LOC120567895 NA non-coding downstream 213154 1766495 ~ 1767066 (+)
LOC120567894 NA non-coding downstream 293155 1846496 ~ 1853159 (+)
LOC120567893 NA non-coding downstream 303818 1857159 ~ 1857661 (+)
LOC120567891 NA non-coding downstream 316844 1870185 ~ 1870674 (+)
G111112 NA other upstream 47396 1504609 ~ 1505015 (+)
G111106 NA other upstream 111264 1440653 ~ 1441147 (+)
si:ch1073-184j22.1 LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261 other upstream 210060 1322214 ~ 1342351 (+)
G111076 NA other upstream 216220 1242649 ~ 1336191 (+)
cdyl cdyl other upstream 459648 1020863 ~ 1092763 (+)
LOC120567875 NA other downstream 7338 1560679 ~ 1561168 (+)
LOC120567873 NA other downstream 19797 1573138 ~ 1573720 (+)
LOC120568490 NA other downstream 27286 1580627 ~ 1582684 (+)
LOC120568491 NA other downstream 49555 1602896 ~ 1604453 (+)
LOC120567878 NA other downstream 57359 1610700 ~ 1611184 (+)

Expression


Co-expression Network