Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120568490 |
| gene name | NA |
| gene type | misc |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 1580627 ~ 1582684 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:0009056 | catabolic process | biological_process |
| GO:1901565 | organonitrogen compound catabolic process | biological_process |
| GO:0009057 | macromolecule catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0044248 | cellular catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU149649 | False | 341 | lncRNA | 0.44 | 2 | 1580643 | 1581104 |
| unassigned_transcript_486 | True | 447 | V_gene_segment | 0.45 | 3 | 1580627 | 1582684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120567882 | NA | coding | upstream | 116031 | 1464102 ~ 1464596 (+) |
| LOC120567883 | NA | coding | upstream | 120709 | 1450389 ~ 1459918 (+) |
| LOC120567879 | NA | coding | upstream | 135962 | 1444163 ~ 1444665 (+) |
| pex5lb | LOC102798103,LOC101487249 | coding | upstream | 292828 | 1226050 ~ 1287799 (+) |
| si:ch1073-184j22.2 | LOC101068556,LOC108228226,LOC105923021 | coding | upstream | 366151 | 1208168 ~ 1214476 (+) |
| LOC120568500 | hnrnpab,LOC100707314 | coding | downstream | 306439 | 1889123 ~ 1890298 (+) |
| LOC120568501 | NA | coding | downstream | 315371 | 1898055 ~ 1906798 (+) |
| LOC120568513 | NA | coding | downstream | 572251 | 2154935 ~ 2158565 (+) |
| LOC120567901 | NA | coding | downstream | 576112 | 2158796 ~ 2161477 (+) |
| LOC120567900 | NA | coding | downstream | 596425 | 2179109 ~ 2179603 (+) |
| LOC120567880 | NA | non-coding | upstream | 63114 | 1517053 ~ 1517513 (+) |
| G111101 | NA | non-coding | upstream | 111604 | 1411929 ~ 1469023 (+) |
| G111096 | NA | non-coding | upstream | 188953 | 1391280 ~ 1391674 (+) |
| G111093 | NA | non-coding | upstream | 195130 | 1385204 ~ 1385497 (+) |
| G111092 | NA | non-coding | upstream | 196458 | 1383940 ~ 1384169 (+) |
| G111125 | NA | non-coding | downstream | 10098 | 1592782 ~ 1597579 (+) |
| LOC120567895 | NA | non-coding | downstream | 183811 | 1766495 ~ 1767066 (+) |
| LOC120567894 | NA | non-coding | downstream | 263812 | 1846496 ~ 1853159 (+) |
| LOC120567893 | NA | non-coding | downstream | 274475 | 1857159 ~ 1857661 (+) |
| LOC120567891 | NA | non-coding | downstream | 287501 | 1870185 ~ 1870674 (+) |
| LOC120567873 | NA | other | upstream | 6907 | 1573138 ~ 1573720 (+) |
| LOC120567875 | NA | other | upstream | 19459 | 1560679 ~ 1561168 (+) |
| LOC120568489 | NA | other | upstream | 27286 | 1552411 ~ 1553341 (+) |
| G111112 | NA | other | upstream | 75612 | 1504609 ~ 1505015 (+) |
| G111106 | NA | other | upstream | 139480 | 1440653 ~ 1441147 (+) |
| LOC120568491 | NA | other | downstream | 20212 | 1602896 ~ 1604453 (+) |
| LOC120567878 | NA | other | downstream | 28016 | 1610700 ~ 1611184 (+) |
| LOC120567876 | NA | other | downstream | 29576 | 1612260 ~ 1612874 (+) |
| LOC120567874 | NA | other | downstream | 53281 | 1635965 ~ 1636493 (+) |
| LOC120568493 | NA | other | downstream | 84084 | 1666768 ~ 1674023 (+) |
