G111177


Basic Information

Item Value
gene id G111177
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1152134 ~ 1154135 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149747
ACGGTtgatgactttattcaacaGAACAGAGAGATATGAACAGCTCAGCAGCCACAACATCAACAACAGATCACTGCAGTGTTGCCACAGCACACACGTACATCTGTCACGAATCAGCCAcggcaacaacagcaacagaaCGTGGCGAGAGGCGAGGTGGCCGCGGCGGCGCCGCAGCGTGGCCGCGGCGTGGCGCAGACGACAGTAAAACGCTGACAGTACAACTACAGAAAATGGTAGATTATTGGGTATAAACCTGGCTTCTCTAATGGCCTCCTTGTGAGCCTGGAACATCTTGACGTTGTTCATGTTGGACTGCCAGTACTTCACGTAGCCCCCGTGGTCCGCCGTCAGCATCCACATGTCGTTGTGAGACCAGGTCATCGCCCGGACCGGACTGTCGTGGGCCTaaagggggaagggggggggacaGAGAGGATCATGGGAAGGGAGGGGCGTTAGGACAACTCACACCATGACTCAGAGCGATATGTAAAGTCTGAACCAGTGCCCGGCTGCATAAAGTCTCTTTAGTTGAAGCTGCAGTGTGCTCTGATTGGAGCTGAAACGGACCTTCTTCACAGCAGCCATGTTGACTTGTCCTAGAGACGGGTCACCCCAACCTTCAGTGTCCCAGTGAGAGATGTCAGCATGCAGTTAGCctggtgagaccgtcctgatctggcgagcactccctctgtgtctccctctctgtgtctctgtctgtctctccctctctgtgtgtctctgtctgtctctccctctctctctctgtgtgtgtgtgtgtctctctccactctctctgtgtctgtctctccctccatctctctgtgtctctgtctgtctctccatctctgtgtctctgtctctccctccatctctctgtgtctctgtctgtctctccctctctgtgtctctgtctctccctctctgtgtctctgtctctccctccatctctctgtgtctctgtctctccctctctgtgtctctgtctctccctctctgtgtctctgtctgtctctctctctctgtgtctctgtctgtctctccctctctgtgtctctgtctc
>TU149748
ACGGTtgatgactttattcaacaGAACAGAGAGATATGAACAGCTCAGCAGCCACAACATCAACAACAGATCACTGCAGTGTTGCCACAGCACACACGTACATCTGTCACGAATCAGCCAcggcaacaacagcaacagaaCGTGGCGAGAGGCGAGGTGGCCGCGGCGGCGCCGCAGCGTGGCCGCGGCGTGGCGCAGACGACAGTAAAACGCTGACAGTACAACTACAGAAAATGGTAGATTATTGGGTATAAACCTGGCTTCTCTAATGGCCTCCTTGTGAGCCTGGAACATCTTGACGTTGTTCATGTTGGACTGCCAGTACTTCACGTAGCCCCCGTGGTCCGCCGTCAGCATCCACATGTCGTTGTGAGACCAGGTCATCGCCCGGACCGGACTGTCGTGGCCTGTAAAATGGTCTCAAAGTTGAAGGTGAGTCCGTTCCACAGCGTGAACTCTCCGCTGGAGGCCCCGGTGACCAGACGTCTGCCTTCAGGG

Function

GO: NA

KEGG:

id description
ko03050 Proteasome
ko05169 Epstein-Barr virus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU149747 True 1069 lncRNA 0.54 3 1152720 1154135
TU149748 False 498 lncRNA 0.55 2 1152134 1154135

Neighbor

gene id symbol gene type direction distance location
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding downstream 15583 1120371 ~ 1136551 (-)
LOC120567934 NA coding downstream 98474 1050897 ~ 1053660 (-)
LOC120567797 NA coding downstream 250938 895507 ~ 901196 (-)
ccr9a NA coding downstream 303489 843808 ~ 848645 (-)
bfsp2 bfsp2 coding downstream 312368 823052 ~ 839766 (-)
sft2d3 sft2d3 coding upstream 49853 1203988 ~ 1205541 (-)
LOC120568025 LOC103365692,LOC101173737 coding upstream 261021 1415156 ~ 1428314 (-)
LOC120567872 NA coding upstream 279100 1433235 ~ 1435275 (-)
LOC120568497 NA coding upstream 602486 1756621 ~ 1764145 (-)
lamc1 lamc1,LOC103398751 coding upstream 1364716 2518851 ~ 2601477 (-)
G111135 NA non-coding downstream 36174 1006083 ~ 1115960 (-)
G111172 NA non-coding downstream 57243 1093446 ~ 1094891 (-)
G111137 NA non-coding downstream 166071 927923 ~ 986063 (-)
G111147 NA non-coding downstream 171674 980124 ~ 980460 (-)
G111128 NA non-coding downstream 254423 850061 ~ 897711 (-)
G111157 NA non-coding upstream 17217 1171352 ~ 1198767 (-)
G111193 NA non-coding upstream 38297 1192432 ~ 1194635 (-)
G111194 NA non-coding upstream 44828 1198963 ~ 1199423 (-)
G111201 NA non-coding upstream 76882 1231017 ~ 1231415 (-)
G111208 NA non-coding upstream 111526 1265661 ~ 1322654 (-)
LOC120568485 NA other downstream 37952 1100064 ~ 1114182 (-)
G111133 NA other downstream 51464 1008233 ~ 1100670 (-)
G111134 NA other downstream 142034 1008894 ~ 1010100 (-)
G111136 NA other downstream 146209 1005071 ~ 1005925 (-)
G110988 NA other downstream 302642 849182 ~ 849492 (-)
mfn1a LOC102798404,LOC103374728,LOC101171942 other upstream 142698 1296833 ~ 1314845 (-)
dhx9 dhx9 other upstream 198887 1353022 ~ 1390538 (-)
LOC120568022 NA other upstream 237673 1391808 ~ 1409528 (-)
G111226 NA other upstream 258821 1412956 ~ 1417959 (-)
LOC120567890 NA other upstream 589165 1743300 ~ 1743839 (-)

Expression


Co-expression Network