LOC120568022


Basic Information

Item Value
gene id LOC120568022
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1391808 ~ 1409528 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149785
cagaatgaaaatctgcagaattaagcggtctgtttttttctgctttggGTGGAGATGTGTTAGCATTCGGAGTTATATTTTGATCagtttaatttgttttcaatCTGTAGAAAATGTGATCTCAAGTTAATTATCTCATGATCTCGAGAATTGGAAACACGGACGGCCTCGGCTTCAGTATAAAAAGTGATATTTTTTGCCTTGATGGTTTATGGTCTACTGGGAATATCTAGTCAGTCTTGGACTAAACCGTGCACTAGAGGGTGACAGTTGATTCCTGTGCACCTTATTTACTGTCCGGCATTTCATAATGTCATTATGTCTCTCACTGTGTATCGAGCCATTCTCTTATAGGAACAGCACATTATACCCAGGTGCAAATATGAAACTGAGCACTGACATCAGCCTATAAAAACAACACTAAACTGAACTTTCCAGTAACTTTAAAGGCACATTACAATGTTTTATGTTAATGTTTTAATCACTTGTGTAGTTTGTACAGATGTTTCTCTTTTGTCAATGGTACTACGGTCCAACATTTCGGTAAACCTAGTTGTTGTCTGTGTCTCTGGATCCTCTCCAGAAAGGTGCAGGGCATGtgtagcctagcttagcacaaagactgaaagCAAGAGGAAActgcacaaacgcacacacacgcacgcacacacacacacacacacacacacgcacacgcacgcacgcatacacacacaaacacacacacacacgcacgcatacacacacacacaaacacacacgcgcacacacagatgcacaaacacacacacacaagcacgcacgcatgcactcacacacacacatgcacgctcacacacaccacacacacacacatgcacaaacacgcacatacacgcacgcacacactcacacacacacatgcacgctcacacacaccacacacacaaacatgcacgcacgcacacacacgcacgcacacacacacacgcacactcgtCTCGTTACCGGCAGCTCTCAGAACGCTGCAGCCCGACAAGTTGCGAGAAGTTGCAAGTTTCatccttttatatatgtcaatggtttcaTCTCGTCTGGTCTCTTTGGTCTGAACGGGCTTTCCAGCACCGCGGTCCAGTACCTGCCTGCTAGACGCTAGATGGCCTCTGATACACGTGTCGCCTTAAACATGAGCACACAGTGCAGGCATGAAAAAACATTTGTTCAGCATTTAGTGACTCCGACGGCAGCTGTTAATAATTAACATCAGGACAATGAgactttatttttcttatgATTAGTTTGAGGAAGTGTTCTAACGTGAATCCATGTCAGCATCCTGACTTACTGTATATAACTGTGAAGTTGTTCACACTTTAATGTAAAACATGCAGTTTGGTGTTAAACTCATGTCTTTTAATCTGTACTGATTTATGTAGACTATGTTCTTTGTTATTGAATATTCCTTTGACATTCAGGTGCCTTAGTGGTGACAGTCTGTGCAGGAAATCTGGAGCTCTAAGgtcacattttacatttattagAGGGTAGTTTGGGGTTTTTGCAAACCTTGTTCCAACCCTATTTGGctctgcatttgtgtctaagtgactgatgtgaacaaaaCTCTTTGAATTTGGTCCAGTTTTGAGGGAGAATGCTGGAACCGACAGCCGTGAACTGGGCTGCAatgctagcgctaaacccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccacatgtaaatgggtgaattaagggtttatttcaaccaaaccatagtggtgattgttggaacagtggaaagatgaaccaagacggcttttgatagttttatttagtttctgtccactttgaatgaagtgtgttttacgatgataaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacatgctaaaagtcctgattatttacatggagtctggtggagatatgctggccctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgcttaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctataca
>XM_039815197.1
aaggtgcCAGTGTGTTTGCagggcctttattttgaaggtgcCAGTGTGTTAGCAGGGACCGTCTCTCCGGACAGAGGCAGAAAGATGTccgcgctgctgctgctgctgctcggcctgctctccctcctcttcttcttctgcctcCTCCGCGGCAGAAACAGaagGGACGACGAACCTCCACTCATTAAAGGCTGGATTCCTTTCATTGGAAAGGCTCTGGAGTTTGGACAAGATGCCCACAAGTTTCTGGAAAAACACAAGAGGAAGTATGGAGACGTTTTCACAGTTCACTTAGCAGGTAAATACATGACGTTCATCATGGACCCGTTACTGTATCCGAGCATCATCAAACACGGCCGCCAGCTGGACTTCCACGAGTTCGCTGCCAAGGTGGCGCCCGTCACCTTCGGCTACCCGTTCGTGGTCCCGGCCCTGCAGGAGCAGATCCACCGCTCCTTCAAACTGCTCCAGGGAGACAACCTGTCCACGCTGACAGAGAGCATGATGGGTAACCTCATGCTGGTGTTGCGCCAGGATCACATGGGCGGCGAGCGCGGCGACTGGCGCAGCGCGAGCATGTACGACTTCTGCAACTCGGTGATGTTCGAGGCTACCTTCCTCACCATGTACGGCCGGCCGGCGGCCGCCAGCCGCCACAGCGGCATGAGCGCGCTGCGGGACGACTTCGTCCGCTTCGACAACATGTTCCCGCTGCTCATCGCCGGGATCCCCGTCTGGCTGCTGGGACGCACCAAGGCCGTCCGCGACAAGCTGATTGGCTACTTTCTGCCGCACAGGATGTCGTGCTGGTCCAACACGTCGGAGTTCATCAGGACGCGCTCGGGGCTGTTTGAGCAGTACGACGCGCTGAGAGACGTCGATAAAGCAGCGCATCACTTTGCCATCCTGTGGGCGTCCGTGGGGAACACCATCCCGGCCACCTTCTGGGCCGTGTACTACCTGGTGAGCCACCCGGCGGCGCTGCAGCGCGTCCGCCAGGAGATCCACGCCGTCCTGAGGCTAGACGGCGTCGAGTTCAGCAGCGACACGGACCTGGCGCTCGACAGGGAGCAGCTGGAGAAGCTCGTTTATCTCGAGAGCGCCATCAACGAGAGTCTCCGTCTGTCCTCGGCCTCCATGAACATCCGCGTTGCTCAGGAGGACTTCAGTCTGCGGCTGGACGCCGAGCGCTCGCTGGGCGTCAGGAAGGGAGACTTCATCGCCCTGTACCCCCAGAGTATGCACCTGGACCCCGACATCTACGACCAGCCGCAGTCGTTCCGAGTGGACCGCTACATTCAGGACGGCCGACTGAAGACGGACTTCTACAAAGACGGACAGAAGCTCAAGTACTACCTGATGCCGTTCGGCTCCGGTTCCTCCATGTGTCCCGGCCGGTACTTCGCCGTCAACGAGATCAAACAGTTCctgtgtctgctgctgctctactTCGATCTGCAGCTGGAGGAGGATCAGAGCCGAGCCACGCAGGACCTGGGCCGGGCCGGGCTGGGCGTCATGCTGCCCGCCGCCGACGTTCGCTTCCGCTACAAACTGCACACGGTCtaactgcagtgtgtgtgtgtatgtctgtgtctgtctgtgtgtgtgtgcgtgcgtgtgtgcttttttttttttttttttttacagttttcagtgatgatccagaatgaaaatctgcagaattaagcggtctgtttttttctgctttggGTGGAGATGTGTTAGCATTCGGAGTTATATTTTGATCagtttaatttgttttcaatCTGTAGAAAATGTGATCTCAAGTTAATTATCTCATGATCTCGAGAATTGGAAACACGGACGGCCTCGGCTTCAGTATAAAAAGTGATATTTTTTGC

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149785 True 2395 TUCP 0.43 1 1391808 1394202
XM_039815197.1 False 1865 mRNA 0.57 6 1394003 1409528

Neighbor

gene id symbol gene type direction distance location
sft2d3 sft2d3 coding downstream 186267 1203988 ~ 1205541 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding downstream 255257 1120371 ~ 1136551 (-)
LOC120567934 NA coding downstream 338148 1050897 ~ 1053660 (-)
LOC120567797 NA coding downstream 490612 895507 ~ 901196 (-)
ccr9a NA coding downstream 543163 843808 ~ 848645 (-)
LOC120568025 LOC103365692,LOC101173737 coding upstream 5628 1415156 ~ 1428314 (-)
LOC120567872 NA coding upstream 23707 1433235 ~ 1435275 (-)
LOC120568497 NA coding upstream 347093 1756621 ~ 1764145 (-)
lamc1 lamc1,LOC103398751 coding upstream 1109323 2518851 ~ 2601477 (-)
smg7 smg7 coding upstream 1216310 2625838 ~ 2662765 (-)
LOC120568021 NA non-coding downstream 18183 1372855 ~ 1373625 (-)
G111222 NA non-coding downstream 43506 1346507 ~ 1348302 (-)
G111208 NA non-coding downstream 69154 1265661 ~ 1322654 (-)
G111213 NA non-coding downstream 97670 1289992 ~ 1294138 (-)
G111201 NA non-coding downstream 160393 1231017 ~ 1231415 (-)
G111235 NA non-coding upstream 61571 1471099 ~ 1508883 (-)
LOC120567884 NA non-coding upstream 88234 1497762 ~ 1497967 (-)
LOC120567885 NA non-coding upstream 115146 1524674 ~ 1526105 (-)
G111245 NA non-coding upstream 140253 1549781 ~ 1664043 (-)
G111254 NA non-coding upstream 237645 1647173 ~ 1660408 (-)
dhx9 dhx9 other downstream 1270 1353022 ~ 1390538 (-)
mfn1a LOC102798404,LOC103374728,LOC101171942 other downstream 76963 1296833 ~ 1314845 (-)
LOC120568485 NA other downstream 277626 1100064 ~ 1114182 (-)
G111133 NA other downstream 291138 1008233 ~ 1100670 (-)
G111134 NA other downstream 381708 1008894 ~ 1010100 (-)
G111226 NA other upstream 3428 1412956 ~ 1417959 (-)
LOC120567890 NA other upstream 333772 1743300 ~ 1743839 (-)
LOC120567903 NA other upstream 931934 2341462 ~ 2405093 (-)
G111573 NA other upstream 1163776 2573304 ~ 2578014 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 1488687 2898215 ~ 3142454 (-)

Expression


Co-expression Network