dhx9 (dhx9)


Basic Information

Item Value
gene id dhx9
gene name dhx9
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1353022 ~ 1390538 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149812
gggtaCAGGGGAGGTTATTAACGATTCGTTGTCATTGTTCTCTAGAAAAGACGAGTCAATCTGATCTGGATACAGAGGCAAAGCCCCTTCCTGTGTCCACCACGGGACTTTATTTCAGTCACAAATGTGAACGGGGAGACACACAATGTTTAGATcacgtttgaattgagccacgAATTACACATCGGATGTTTGTCAGTTTAGTTTTGTGGGGGTGTTACAGTAGGTAACGTTACTCTCACCTTCTTTCTCTTCCCGGCTGATAGAAAGATGCTGATAGAACAGCATGTGAGATAACGGTACACAGTATGTTTTTCTGAAATAAGGTCCCATGGGGTCCACCAGAAGGACAGGGACTtcacctctctctgtcttctgaAGTTTAGTGAGGCCACAAATCTTCCTCTCTGTCGTTGTTGAGAGGACAAAATGTTTGTCCTCATCTGGGCCAAGATAACACTCCTCTCTTCTGTCAGCTGTTGAAACCAACG
>TU149819
CCAACGACAACAAACCGAGCCAGCGGGTGTCTGTCTGGAAGAACTGTTAGCTTTACTGGCCGGACTTTAGATTAAAGGGTCTACAGAGGAGGAAACTCCCCGCCCGTCAGTCCTCCATGGCGGACGTCAAGAACTTCCTGTATGCCTGGCTTGGGAAAAAGAAGCTGACTCCCAGCTATGACATCCGAGCTGCAGGGAACAAAAACAGGCAGAAGTTTTTGTGTGAGGTCCGTGTTGACAGCTACAACTACATCGGGATGGGGAACTCCACCAACAAGAAGGACGCTCAGACAAACGCCGCCAGAGACTTCGTCAGCTACCTGGTCCGAACCGGGGAAATGAGCGCCGCGGAAGTCCCGGCTGTTGGGGTGAGCGCTCCAGGCGGCGACCAACCTGACGGAGGAAACGGGGGAGGAAACGGAGGAGGAAACGGAGGAGGAAACGGAGGCTTTGGATGCCTCCCTTCCAGCGGCCCCCTGCCGCCTCACCTTCTAGTCAAAACTGAACCAGaaGAGAGTGGTGGGCCGGTCCCGGGAGTCACTGGACTGGGCTACtccggaggagga
>XM_039816052.1
CGTCCAGCGTTCAACAACATGGGGAGGAAGTTCTAGCCAGAGACGGTTGAGCCAACGACAACAAACCGAGCCAGCGGGTGTCTGTCTGGAAGAACTGTTAGCTTTACTGGCCGGACTTTAGATTAAAGGGTCTACAGAGGAGGAAACTCCCCGCCCGTCAGTCCTCCATGGCGGACGTCAAGAACTTCCTGTATGCCTGGCTTGGGAAAAAGAAGCTGACTCCCAGCTATGACATCCGAGCTGCAGGGAACAAAAACAGGCAGAAGTTTTTGTGTGAGGTCCGTGTTGACAGCTACAACTACATCGGGATGGGGAACTCCACCAACAAGAAGGACGCTCAGACAAACGCCGCCAGAGACTTCGTCAGCTACCTGGTCCGAACCGGGGAAATGAGCGCCGCGGAAGTCCCGGCTGTTGGGGTGAGCGCTCCAGGCGGCGACCAACCTGACGGAGGAAACGGGGGAGGAAACGGAGGAGGAAACGGAGGAGGAAACGGAGGCTTTGGATGCCTCCCTTCCAGCGGCCCCCTGCCGCCTCACCTTCTAGTCAAAACTGAACCAGaaGAGAGTGGTGGGCCGGTCCCGGGAGTCACTGGACTGGGCTACtccggaggaggaggaggaagaggagggggaggaggaggaaactcTGGctggggaggaggaggaggaggaggagaagaagctcAGTGGGAACGAGGAGCCAACCTGAAGGAGTACTACGCCCGGAGAGATGAACAGGAAGCCCAGGATACTCTGGAGTCAGAGGAGGTGGACCTGAACGCTAATCTCCATGGCAACTGGACGCTGGAGAACGCCAAGGCGCGTCTGAACCAGTTCTTCCAGAAGGAGAAAACCAGAAAACCGCAAGCTACAAACGCCAAATGGACGGACACGACAGATCGGCAAAGTTCGGTTCCAACGCTCCCGGCGGTCCACGATGCGGTGACCGCTCAGCTCTGCAGCCCCGTCTCCTACCGCAGCGCCTGtgtccaGCTGGAGCCGTTTGACGTCAGTGTGTCTGcagacctgcagcagcagctggccGCCGTCGTCCAGGAACTCGGAGTCCACATCCCCCCACCGCCTACAGACCCCTCCTGCAAAGTGTCTCTGGTTCAGGGCAAGATGGCAACATTTGAGCCGTCCCAGCGCCAGAGCGGAGCAGGGGTCGTCCCGTGGTCGCCTCCCCAAGTCAACTGGAACCCCTGGACCAGCAGCAACATCGACGAGGGACCGCTGGCCTTCTGCACGCCGGAGCAGATCAGTGGCGAGCTGCACGACGAGCTGATGCACCAGCTGGAACACGATGAAAACCTGCAGAAGATCCTGGGGGAGCGCGAGCAGCTGCCAGTCAAACAGTTTGAGGAGGAGATCATGGCCGCCGTGGAGAACAACGCCGTAGTGATCATCAGAGGAGCCACGGGCTGCGGTAAAACCACCCAGGTCCCTCAGTACATCCTGGACAGCTTCATTAAGAGAGGCAAAGCCTCCGACTGCAACATCGTGGTCACCCAGCCCAGAAGGATCAGCGCCGTGTCGGTGGCCGAGCGAGTCGCCTACGAGAGAGCCGAGGACATCGGGAAGAGCTGCGGCTACAGCGTCCGCTTTGAGTCCATCCTGCCTCGGCCGCACGCCAGCGTCCTCTTCTGCACCGTCGgCGTCTTGCTGCGGAAGCTTGAAGCAGGAATCCGAGGCATCAGTCACGTTATCGTTGATGAGATCCACGAGAGAGACATCAACactgaCTTCCTGATGGTGGTCCTCCGAGACGTGATCCAGGCTTACCCGGAGGTCCGCGTCATCCTCATGTCGGCCACCATCGACACCACCATGTTTAAAGAATACTTCTTCAACGCTCCCATCATCGAGGTGTTCGGACGCACCTTCTCTGTCCAAGAGTATTTCCTGGAGGATTCCATCCAGATGACCAACTTCGTCCCTCCGCCGATGGACCGCAAGAGGAAGGATAAAGacgaggaaggaggaggaggagaggatgatacgaACTGTAATCAGATCTGCGGGCCGGACTACTCGGCGGAGACGAAGCGTTCGATGGCTCAGATCAGCGAGAAGGAGACGTCCTTCGAGCTGGTGGAGGCTCTGCTGAGGTACATCGAGACGCTGCAGGTAGCCGGCGCCGTTCTGATCTTCCTGCCCGGCTGGAACCTCATCTACTCCATGCAGAGACACCTGGAGACCAACCCGCACTTTGGAAGTAACCGGTACCGAATCCTGCCGCTCCACTCACAGATCCCCCGAGAGGAGCAGAGGATGGTGTTTGAACCGGTTCCCGACAACATCAGGAAGGTAATTCTGTCCACCAACATCGCAGAGACGAGCATCACCATCAACGACGTCGTCTACGTCATCGACTCCTGCAAGCAGAAGGTGAAGCTCTTCACCTCCCACAACAACATGACCAACTACGCCACCGTCTGGGCCTCCAAAACCAACCTGGAGCAGAGGAAAGGCCGAGCCGGCCGAGTGCGAGCCGGATTCTGCTTCCACCTCTGCAGCCGCGCTCGATTCGAGAAGCTGGAGACTCACATGACTCCAGAGATCTTCAGGACGCCGCTGCATGAAGTCGCTCTGAGCATCAAACTGCTGAGACTCGGCGCCATCGGACACTTCCTGTCCAAGGCCATCGAGCCACCGCCGCTGGACGCCGTCATCGAGGCCGAACACACTCTGAGAGaGCTGGACGCCCTGGACACTAACGATGAACTGACTCCTCTGGGGAGGATTCTGGCTAAGCTGCCCATCGAGCCACGACTGGGGAAGATGATGATCATGGGCTGCATCTTCCATGTTGGAGATGCCATGTGCACCATCTCAGCCGCCTCCTGTTTCCCCGAGCCTTTCATCAGCGAGGGCAAACGTCTCGGCTTCGTGCACAGGAACTTCTCCGGCAGCCGCTTCTCGGACCACGTGGCTCTGCTGTCCGTCTTCCAGGCCTGGGACGACGTCAGGATTAGCGGCGAGGACGCAGAAATTCGTTTCTGTGAACACAAACGTCTCAACATGTCGACTCTGAGGATGACCTGGGAGGCCAAAGTCCAGCTGAAGGAGATCCTGGTCAACTCTGGATTCCCTGAAGAGTGTCTGCTGACTCAGATGTTCAACACGGTCGGACCGGACAACAGCCTGGACGTGGTGGTTTCTCTGCTGACCTACGGCTCCTACCCCAACGTGTGCTTCCacaaagagaagaggaagatcCTAACCACCGAGGGGCGCAACGCCCTCATCCACAAGTCCTCCGTTAACTGCCCCTTCAGCAGCCACGACATGACCTACCCCTCGCCCTTCTTCGTCTTCAGCGAGAAGatTCGGACCCGAGCGATCTCGGCTAAAGGGATGACTCTGGTCAGTcctctgcagctgctgctgttcGCCTGCAAGAAGATCAGCTCTGACGGAGAAATCGTGGAGCTGGATGACTGGATCAAACTGCGGATTCCTCACGAGGTGGCGGGTGGCATCGCAGCCCTGCGGGCCGGACTGGAGGCGCTGGTGGTGGAAGTGACCAAAGACCCAGAATACATCCGACAGATGGACccgaccaatcagcagctgCTGAACCTCATCAGACTCACATCCAAACCTTCAGCTGCTGGACTCAACCTGATGGCCAACAcccagagGATGGGTGACGGTCCCCGACCTCCGAAGATGGCACGCATGGATGGAGGCGGCAGCGGGGGCTACCGAGGAGGAGGGGGCGGCtacagaggaggagggggatatgggggaggaggaggagggtacAGAGGGGGAGGTGGGTACAGGGGGAGGAGGGGATATGGGGGAGGAGGTTATAGAGGGGGTGGCGGttacagaggaggaggaggaggagggtatggaggaggtgggggaggctacagaggaggaggagggtatggagaggggggaggagggtacaggggaggaggagggggaggaggaggaggggggggagggtaCAGGGGAGGTTATTAACGATTCGTTGTCATTGTTCTCTAGAAAAGACGAGTCAATCTGATCTGGATACAGAGGCAAAGCCCCTTCCTGTGTCCACCACGGGACTTTATTTCAGTCACAAATGTGAACGGGGAGACACACAATGTTTAGATcacgtttgaattgagccacgAATTACACATCGGATGTTTGTCAGTTTAGTTTTGTGGGGGTGTTACAGTAGGTAACGTTACTCTCACCTTCTTTCTCTTCCCGGCTGATAGAAAGATGCTGATAGAACAGCATGTGAGATAACGGTACACAGTATGTTTTTCTGAAATAAGGTCCCATGGGGTCCACCAGAAGGACAGGGACTtcacctctctctgtcttctgaAGTTTAGTGAGGCCACAAATCTTCCTCTCTGTCGTTGTTGAGAGGACAAAATGTTTGTCCTCATCTGGGCCAAGATAACACTCCTCTCTTCTGTCAGCTGTTGAAACCAACGTGTTAGTTTGTGTTTGATTACATTTGATTGTATGTCTGTATTTATGGTTTTATGTGTAACTGCATTCTGCAATAAACTTGACATTTACAGCTGA

Function

symbol description
dhx9 Predicted to enable 3'-5' DNA helicase activity and RNA binding activity. Acts upstream of or within response to virus. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasm and nucleolus. Orthologous to human DHX9 (DExH-box helicase 9).

NR:

description
ATP-dependent RNA helicase A isoform X1

GO: NA

KEGG:

id description
K13184 DHX9; ATP-dependent RNA helicase A

RNA

RNA id representative length rna type GC content exon number start site end site
TU149812 False 491 lncRNA 0.45 1 1353116 1353606
TU149819 False 566 TUCP 0.58 5 1386128 1390487
XM_039816052.1 True 4547 mRNA 0.57 30 1353022 1390538

Neighbor

gene id symbol gene type direction distance location
sft2d3 sft2d3 coding downstream 147481 1203988 ~ 1205541 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding downstream 216471 1120371 ~ 1136551 (-)
LOC120567934 NA coding downstream 299362 1050897 ~ 1053660 (-)
LOC120567797 NA coding downstream 451826 895507 ~ 901196 (-)
ccr9a NA coding downstream 504377 843808 ~ 848645 (-)
LOC120568025 LOC103365692,LOC101173737 coding upstream 24618 1415156 ~ 1428314 (-)
LOC120567872 NA coding upstream 42697 1433235 ~ 1435275 (-)
LOC120568497 NA coding upstream 366083 1756621 ~ 1764145 (-)
lamc1 lamc1,LOC103398751 coding upstream 1128313 2518851 ~ 2601477 (-)
smg7 smg7 coding upstream 1235300 2625838 ~ 2662765 (-)
G111222 NA non-coding downstream 4720 1346507 ~ 1348302 (-)
G111208 NA non-coding downstream 30368 1265661 ~ 1322654 (-)
G111213 NA non-coding downstream 58884 1289992 ~ 1294138 (-)
G111201 NA non-coding downstream 121607 1231017 ~ 1231415 (-)
G111194 NA non-coding downstream 153599 1198963 ~ 1199423 (-)
G111235 NA non-coding upstream 80561 1471099 ~ 1508883 (-)
LOC120567884 NA non-coding upstream 107224 1497762 ~ 1497967 (-)
LOC120567885 NA non-coding upstream 134136 1524674 ~ 1526105 (-)
G111245 NA non-coding upstream 159243 1549781 ~ 1664043 (-)
G111254 NA non-coding upstream 256635 1647173 ~ 1660408 (-)
mfn1a LOC102798404,LOC103374728,LOC101171942 other downstream 38177 1296833 ~ 1314845 (-)
LOC120568485 NA other downstream 238840 1100064 ~ 1114182 (-)
G111133 NA other downstream 252352 1008233 ~ 1100670 (-)
G111134 NA other downstream 342922 1008894 ~ 1010100 (-)
G111136 NA other downstream 347097 1005071 ~ 1005925 (-)
LOC120568022 NA other upstream 1270 1391808 ~ 1409528 (-)
G111226 NA other upstream 22418 1412956 ~ 1417959 (-)
LOC120567890 NA other upstream 352762 1743300 ~ 1743839 (-)
LOC120567903 NA other upstream 950924 2341462 ~ 2405093 (-)
G111573 NA other upstream 1182766 2573304 ~ 2578014 (-)

Expression


Co-expression Network