LOC120567896


Basic Information

Item Value
gene id LOC120567896
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1709322 ~ 1935777 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149847
tggaatccagcggacttaaacttttggttctgtTCATACATCATGGTTgatcaaaatgtaggaaatgttgtgccggtcgcagacatgtaatTATGGAATCCAGCGGACTTAAACTTTTGGTTCTGTTCATACCAGCTGCTGatagaaaacaatgaaaatagaTCGGCCACAATGAGCTCCTTCCATTGTTCATGTTGATCTGCATCCCAAATAGACACTGAAACACTAATAAAACTGAAAGAACTGGTTGTTGATATTCCATAACATCATAATTCACAGAAGAACTCAGTAGAATGACATTTTTACCACAGAACATTTTACTAACTTAAAAATTTCATGAAAACAGAAGCTTCCCCATCAACTGCAACATCTTTGAATTTGACCTCAAATGGCTACAGAGGACCAAAAGATACTAAACTGCCACTTTACATTGAAGAGACATtataaaaaagcataaaacataacATGTTGAAATATTAAGTCTCAGTTTACTTTCAAACTTTCTAGAAATAAATACTAAAGGCATGTACAGGTTCATTACAATTTAAGAAAATGAGGAACTAAGTTAATAACCACAATCACATTTAATGCTCTGTCTCAGTTCTACAGTCAGTCAGTGTCTTTCTCATCTCTGCTGCAGGTTCAACATTCAAGTCAAACATTAAATCaactcattaaaaaaaagtaaggatGGCAGTTTGGGACAGAAAGATATCCTGTTGCTTCACGTTACTGCTCGCTGGTAAGACATGGACTTTATTCACGTTACATTAATATCTTTaatgacgtttttgtcatttatgcTTCTGAAGTTGCAGCTCTGaatctgttttattattttcttgtaTAGTTTTCTGTTTTAGTAGCTGAGGCCCATCTGTATAGTTGTTTTatggtctctctcctctctggctGTAGTCGACAGTGTCACTGTATCGTGTCAACGACTGCTGTAATTTGTCAATGACTGTCATGTTAGTGCTGTTCAGTAAAAAGGACTTTAACAGGGTACATGTCATGTCCTTCATTCCTAAACTCACTGTGTTGTTGTTCCAGGTGCTCTGGGTCAAATTGTGAACTATCCAGATCCTTTTTGTAGTGTGATAGGATCAACAGTCAACATCCCTTGCTCCTTCACACCACTGAAGTCTGTCATGGACGACAATGGAAAAGAAGTTTTGATCGAGGTCGTCAGAGTCATCTGGTGCAAGAACCATGAATTCTGTTTCGGAGAGACTCCGTGTGTGTACGACAGCGAATCAAACAACACCGACCCTCGTTACAGATA
>XM_039814970.1
atggaacattggctgtggatTATTCTTGCTGCTCTTTTCTTTGGTTCAACATTCAAGTCAAACATTAAATCaactcattaaaaaaaagtaaggatGGCAGTTTGGGACAGAAAGATATCCTGTTGCTTCACGTTACTGCTCGCTGGTGCTCTGGGTCAAATTGTGAACTATCCAGATCCTTTTTGTAGTGTGATAGGATCAACAGTCAACATCCCTTGCTCCTTCACACCACTGAAGTCTGTCATGGACGACAATGGAAAAGAAGTTTTGATCGAGGTCGTCAGAGTCATCTGGTGCAAGAACCATGAATTCTGTTTCGGAGAGACTCCGTGTGTGTACGACAGCGAATCAAACAACACCGACCCTCGTTACAGATACCTGGGAGACAAGAAGGGAGACTGCACTTTACAGATCTCAGATTTACAGGAGGAAGACGAAGCAATTTTTCGCTTCAGAGTGGAAACTAATGACAGCAGAGCATCTTTTACTGGCCAACCAGGAGTGAGAGTCAGAGCCGCTGGTGCTCTGGGTCAATGTGTCAACTATCCAGATAGCCCTGTTTGGGCTATGAAAGGATCGACCGTCACCTTCCCCTGCTCCTTCACACCACTGAAGTCTGTCAACAACAATGGAAAAGAAGTTTTGATTGAGATCAACAGAGTCGTCTGGTGCAAGAACCATGAAACCTGTTTCGGAGAGACTCTGTCTGTGTACGACAGCGAATCAAACAACACCGACCCTCGTTACAGATACCTGGGAGACAAGAAGGGAAACTGCACTTTACAGATTTCAGATTTACAGGAGGAAGATGGtgcaacttttcgcttcagagTGGAAACTAATGACAGCAGAGCAACTTTTACTGGCCAATCAGGCGTGAGACTAGGAGTCATAGGTGCTCTGGGTCAAAGTGTGAACTATCCAGATCCTGTTTGTGGTGTGATAGGATCAACAGTCACCCTCCCCTGCTCCTTCACACCAGTCGTTGATGATGCAGGAGCACCTTTGATCAAGGGCGTCAGAGTCGTCTGGTGCCAGAACGAGGAATTCTGTCTGCTTACCGCTACGTCTGTGTACGACAGCgaatcaaacaacaacaaccctcgTTACAGATACCTGGGAGACAAGAAGGGAAGCTGCACTTTACAGATCTCAGATTTACAGGAGAAAGACGATGCAACTTTTCGTTTTAGAGTGCAAACTAATGATcgcaaaaaaacttttactgGCCAACCAGGAGTGAGAGTCACAGTCGAAGATGGTGCTCAGATGAAGATAAGAAGCTCCAGAGATGACAGAGTGTTTAAAAAAGGGGAAACAGTCACACTGAACTGTTCTGCTGCAAGCTGTACTATCCACCAACTGGATGTCACCTGGTTCAAAGACGGCTTCACCCTCTGTGAGTCTGGCCCCAACCTCACTCTGGGTTATCTGACTGCAAAGGATTCTGGGAACTACACCTGTGGTTTGAAGAGGAACAACCACAACCTCTCCGCGCCGTATAGCCTGCACGTGGAGGCTGACGAGGAAGGAACAATAGCATTTGACACACTGCTGGCTGTTCGTCTGCTTCTCTTCACTCTGCACACTGTTCTCGTCGTCATAGTGACGTCCATCATCATCAAAAGGACGTGCGTTTGCAAAAAATAGATGATGGTGTAGGTGAGTCACTAA

Function

GO: NA

KEGG:

id description
ko04115 p53 signaling pathway
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
TU149847 False 1288 lncRNA 0.38 2 1709322 1926604
XM_039814970.1 True 1674 mRNA 0.47 8 1924151 1935777

Neighbor

gene id symbol gene type direction distance location
LOC120567882 NA coding upstream 244726 1464102 ~ 1464596 (+)
LOC120567883 NA coding upstream 249404 1450389 ~ 1459918 (+)
LOC120567879 NA coding upstream 264657 1444163 ~ 1444665 (+)
pex5lb LOC102798103,LOC101487249 coding upstream 421523 1226050 ~ 1287799 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding upstream 494846 1208168 ~ 1214476 (+)
LOC120568513 NA coding downstream 219158 2154935 ~ 2158565 (+)
LOC120567901 NA coding downstream 223019 2158796 ~ 2161477 (+)
LOC120567900 NA coding downstream 243332 2179109 ~ 2179603 (+)
LOC120567899 NA coding downstream 285671 2221448 ~ 2221891 (+)
LOC120568517 NA coding downstream 527896 2463673 ~ 2464840 (+)
G111125 NA non-coding upstream 111743 1592782 ~ 1597579 (+)
LOC120567880 NA non-coding upstream 191809 1517053 ~ 1517513 (+)
G111101 NA non-coding upstream 240299 1411929 ~ 1469023 (+)
G111096 NA non-coding upstream 317648 1391280 ~ 1391674 (+)
G111093 NA non-coding upstream 323825 1385204 ~ 1385497 (+)
G111296 NA non-coding downstream 27931 1963708 ~ 1963929 (+)
G111297 NA non-coding downstream 32630 1968407 ~ 1968625 (+)
G111303 NA non-coding downstream 48164 1983941 ~ 1984348 (+)
G111305 NA non-coding downstream 51761 1987538 ~ 1988133 (+)
G111332 NA non-coding downstream 292960 2228737 ~ 2229234 (+)
LOC120568494 NA other upstream 26036 1451874 ~ 1683286 (+)
LOC120568493 NA other upstream 35299 1666768 ~ 1674023 (+)
LOC120567874 NA other upstream 72829 1635965 ~ 1636493 (+)
LOC120567876 NA other upstream 96448 1612260 ~ 1612874 (+)
LOC120567878 NA other upstream 98138 1610700 ~ 1611184 (+)
LOC120568507 NA other downstream 71023 2006800 ~ 2015872 (+)
LOC120568512 NA other downstream 108943 2044720 ~ 2049498 (+)
LOC120567898 NA other downstream 154452 2090229 ~ 2090739 (+)
LOC120568514 NA other downstream 299044 2234821 ~ 2237560 (+)
G111358 NA other downstream 335862 2271639 ~ 2271927 (+)

Expression


Co-expression Network