LOC120568516


Basic Information

Item Value
gene id LOC120568516
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2439709 ~ 2440343 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU149991
gctcttcctctctctcctcccctctcactGCAGACATGAAACACTGGCTGACAAACATCCTGATTCTGACTCTCTGGCTAGAGTGTAAAGGAGAAGACAGAGTGAACCAGCCAACACGAGATGTCATTACTACTGAAGGAGAGACAGTTACTCTTGGCTGTACATTTGAGACAACTGATCCAAGTCCCACTTTGTTTTGGTACAAACAAGAAGAAAATGATTACCCAAAGATGATGCTGCGACGCTTCTCTGTAAAAACTGATAATTCtaaagagcaagagagaatTGATGCAACAATCAAGGATAAGTCAGTTCCTCtgaagatccagaagcttcagctgtctgactctgctgtgtactactgtgctatgaagcc
>unassigned_transcript_508
AAGGCCCAGATCCATCAGAGTAtcaatgctcttcctctctctcctcccctctcactGCAGACATGAAACACTGGCTGACAAACATCCTGATTCTGACTCTCTGGCTAGAGTGTAAAGGAGAAGACAGAGTGAACCAGCCAACACGAGATGTCATTACTACTGAAGGAGAGACAGTTACTCTTGGCTGTACATTTGAGACAACTGATCCAAGTCCCACTTTGTTTTGGTACAAACAAGAAGAAAATGATTACCCAAAGATGATGCTGCGACGCTTCTCTGTAAAAACTGATAATTCtaaagagcaagagagaatTGATGCAACAATCAAGGATAAGTCAGTTCCTCtgaagatccagaagcttcagctgtctgactctgctgtgtactactgtgAAGTGTAA

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU149991 False 376 TUCP 0.44 2 2439736 2440198
unassigned_transcript_508 True 401 V_gene_segment 0.43 3 2439709 2440343

Neighbor

gene id symbol gene type direction distance location
LOC120567899 NA coding upstream 217818 2221448 ~ 2221891 (+)
LOC120567900 NA coding upstream 260106 2179109 ~ 2179603 (+)
LOC120567901 NA coding upstream 278232 2158796 ~ 2161477 (+)
LOC120568513 NA coding upstream 281144 2154935 ~ 2158565 (+)
LOC120568501 NA coding upstream 532911 1898055 ~ 1906798 (+)
LOC120568517 NA coding downstream 23330 2463673 ~ 2464840 (+)
nmnat2 nmnat2 coding downstream 225481 2665824 ~ 2689216 (+)
LOC120568826 LOC106675582 coding downstream 292263 2732606 ~ 2733898 (+)
ptmab NA coding downstream 858521 3298864 ~ 3304226 (+)
LOC120568524 NA coding downstream 1156072 3596415 ~ 3600572 (+)
G111370 NA non-coding upstream 4230 2415364 ~ 2435479 (+)
G111371 NA non-coding upstream 24393 2414102 ~ 2415316 (+)
G111368 NA non-coding upstream 100290 2338391 ~ 2339419 (+)
G111357 NA non-coding upstream 179293 2260139 ~ 2260416 (+)
G111355 NA non-coding upstream 193508 2245881 ~ 2246201 (+)
LOC120568944 NA non-coding downstream 33621 2473964 ~ 2474785 (+)
G111389 NA non-coding downstream 61550 2501893 ~ 2554775 (+)
G111392 lamc1,LOC103398751,LOC104953968 non-coding downstream 73811 2514154 ~ 2519456 (+)
G111401 NA non-coding downstream 115048 2555391 ~ 2556012 (+)
G111428 NA non-coding downstream 214530 2654873 ~ 2655433 (+)
LOC120568515 NA other upstream 139829 2282608 ~ 2299880 (+)
G111358 NA other upstream 167782 2271639 ~ 2271927 (+)
LOC120568514 NA other upstream 202149 2234821 ~ 2237560 (+)
LOC120567898 NA other upstream 348970 2090229 ~ 2090739 (+)
LOC120568512 NA other upstream 390211 2044720 ~ 2049498 (+)
G111404 NA other downstream 124792 2565135 ~ 2667938 (+)
G111388 NA other downstream 136778 2577121 ~ 2577931 (+)
LOC120568825 NA other downstream 302081 2742424 ~ 2751572 (+)
rasal2 NA other downstream 347436 2787779 ~ 2826854 (+)
G111452 NA other downstream 376601 2816944 ~ 2824588 (+)

Expression


Co-expression Network