G111431


Basic Information

Item Value
gene id G111431
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2661228 ~ 2808845 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150063
agagacacacacacacacacacactcagacacacacacagacacacacacactcagacacacacacacacacagagacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacagagacacacacatacacacacacagagacacacacacatacacacacacacacacacagagacacacagacacagagacacacaaacacagacacag
>TU150064
agagacacacacacacacacacactcagacacacacacagacacacacacactcagacacacacacacacacagagacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacagagacacacacatacacacacacagagacacacacacatacacacacacacacacacagagacacacagacacagagacacacaaacacagacacag
>TU150065
agagacacacacacacacacacactcagacacacacacagacacacacacacacagacacacacacacacacacacacagagacacacacacacacagagacacacacagacacacacagagacacacagacacagagacacacacacacacacacacacacacacagagacacacagacacagagacacacacacacacacaacacacagacagagacacacacacacacagacacacacacacacagagacacacacacatacacacacacacacacacagagacacacagacacagagacacacaaacacagacacag
>TU150066
cacacagagacacagagacacacacacagagacacacacacagagacacacacacacagacacacacacacacacagagacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacagagacacacacatacacacacacagagacacacacacatacacacacacacacacacagagacacacagacacagagacacacaaacacagacacag
>TU150067
acagagacacacacacacagagacacacacacagagacacacacacacagacacacacacacacacagagacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacagagacacacacatacacacacacagagacacacacacatacacacacacacacacacagagacacacagacacagagacacacaaacacagacacag

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04510 Focal adhesion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU150063 False 236 lncRNA 0.49 4 2661378 2808845
TU150064 False 236 lncRNA 0.49 4 2661228 2808845
TU150065 True 321 lncRNA 0.49 6 2661228 2808845
TU150066 False 239 lncRNA 0.49 3 2806185 2808845
TU150067 False 230 lncRNA 0.49 3 2806261 2808845

Neighbor

gene id symbol gene type direction distance location
LOC120568517 NA coding upstream 196388 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 439337 2221448 ~ 2221891 (+)
LOC120567900 NA coding upstream 481625 2179109 ~ 2179603 (+)
LOC120567901 NA coding upstream 499751 2158796 ~ 2161477 (+)
LOC120568513 NA coding upstream 502663 2154935 ~ 2158565 (+)
ptmab NA coding downstream 490019 3298864 ~ 3304226 (+)
LOC120568524 NA coding downstream 787570 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 906721 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 995053 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 1006975 3815820 ~ 3825434 (+)
G111428 NA non-coding upstream 5795 2654873 ~ 2655433 (+)
G111382 NA non-coding upstream 38727 2433139 ~ 2622501 (+)
G111401 NA non-coding upstream 105216 2555391 ~ 2556012 (+)
G111389 NA non-coding upstream 106453 2501893 ~ 2554775 (+)
G111392 lamc1,LOC103398751,LOC104953968 non-coding upstream 141772 2514154 ~ 2519456 (+)
G111448 NA non-coding downstream 34858 2843703 ~ 2889240 (+)
G111469 NA non-coding downstream 82313 2891158 ~ 2891458 (+)
G111471 NA non-coding downstream 88479 2897324 ~ 2897840 (+)
G111475 LOC101473605,LOC102292558 non-coding downstream 101704 2910549 ~ 2931445 (+)
G111478 NA non-coding downstream 105613 2914458 ~ 2930622 (+)
G111388 NA other upstream 83297 2577121 ~ 2577931 (+)
LOC120568516 NA other upstream 220885 2439709 ~ 2440343 (+)
LOC120568515 NA other upstream 361348 2282608 ~ 2299880 (+)
G111358 NA other upstream 389301 2271639 ~ 2271927 (+)
LOC120568514 NA other upstream 423668 2234821 ~ 2237560 (+)
G111452 NA other downstream 8099 2816944 ~ 2824588 (+)
G111484 NA other downstream 122794 2931639 ~ 3066029 (+)
G111486 LOC107102160,LOC102799505,LOC103352980 other downstream 129304 2938149 ~ 2940848 (+)
G111494 NA other downstream 208113 3016958 ~ 3075901 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other downstream 579209 3388054 ~ 3399183 (+)

Expression


Co-expression Network