rasal2


Basic Information

Item Value
gene id rasal2
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2787779 ~ 2826854 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150106
GGGAACAAAGAGGAGTACATGGCGTTCATGAACGACTTCCTGGAGCACGAGTGGGCGGGGATGATGCGTTTCCTGTCGGAGATCTCCAACCCGGAGACGCTGTCCAGCACGCCGGGCTACGAGGGCTACATCGACCTCGGCCGCGAGCTGTCGGTGCTGCACGCACAGCTCTGGGAGGTGGTCTCGCAGCTGGACAAGGTACGCTGGGggctggggtgtgtgtgtgtgtgtgagagtgtgtgtggagagtgtgtgtgagagtgtgtgtgtctgtgtgagtgtgtgtgtgtcggtgctGCACGCACAGCTCTGGGAGGTGGTCTCAGGGAGTTGACAAGGTAATgcgtggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgagagtgtgtgtgtgagagtgtgtgtgtctgtgtgtctctgtgtatgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgcgcatgtgagtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgcatgtctgtgtgtgtgtgcatgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtctgtgtgtgtgtgcatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtctgtgtgtgtgtgcatgtctctgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgcagagctgTAATGTACCTCCTTTATAGAGCCTGTTTGCACCTGTCAGGGGGGTACTTggctaaaaaaatatttcaaaggggggggtacattattgtaaaaaggtttgagaaccactgcggTAAAGAATGAATGCTCAGTGATTGGtccgtgctgtgtgtgtgtgatgtgaacATCTGCTCAGTGATTGGtccgtgctgtgtgtgtgtgatgtgaacATCTGCTCAGTGATTGGtccgtgctgtgtgtgtgtgatgtgaacATCTGATGACATAAATAACACGAGACATCATAACACCAGCAGCAAAGATCACTCCATCGCTGTTCGTTTAACCATTTTTGACCCCACGCTGCGTGGCTGAACTTCACAGCATGGCCTGAACTCACCCTCCTCACCCCTCCCTCACCCCTCCCTCACC
>XM_039816303.1
GTTCGGGAACAAAGAGGAGTACATGGCGTTCATGAACGACTTCCTGGAGCACGAGTGGGCGGGGATGATGCGTTTCCTGTCGGAGATCTCCAACCCGGAGACGCTGTCCAGCACGCCGGGCTACGAGGGCTACATCGACCTCGGCCGCGAGCTGTCGGTGCTGCACGCACAGCTCTGGGAGGTGGTCTCGCAGCTGGACAAGGGTGAAAATTCCTTCCTGCAGGCCACCGTAGCAAAGCTGGGCCCGCTGCCGAGGATTCTGGGAGACATCTCTCGCTGCCTGGCCGCCCCGACGCCCGTCCAGCAGCAGCTGAGACGTTTCCAAGAGCACAACTCCGCGCACAACATCAGCGGCAGCCTGTCGTCAGGGTTACAGCGCATCTTCGAGGACCCCGCCGACAGCCGCAGTGATGCCCGCAGCCTGCAGTCTCCGCTCGGTGACGCGATGGAGGGTTACGTGCGCGGgcagcgccccccgctggcccCCCAGCACCCCTCGGCCCACGCCAGCTTCTCCGACCCCGAGGACCGGGACGTCCCGCTGCCCAACGGGCGCAGCGTCTCCCTGGTGGACCTGCAGGACGCCCAGCAGAGCCTGGGGGGGACGCCGCCACCGCCGCCGCCACACCACGAGGCCCCGCCACGCCTCAGCAGGGTCGGCTCGCAGGCCTCCATCGGGCACGCCGCGCCACAGCTGCCGCTACCACTCAACTACAACCCGCTCACGCCACAGCCACACCACGGCAAATCCTCGCCGCGGGACGGCCAGCCACAGAGCGCACCGCAGgtGAGGCGTCCGCTGCCCCCGTCTCTCAGCCAGCAGCGCAGCCTGCAGCCGCTCTCCTTCCAGAACCCCGTGTACCACCTGAGCAACCCGGGCACACGCTCCGCCCACTCTCTCTCGCAGCCTTGCCACGGCGACTCGAGCTCGGAGAACCTGAGCACGGAGAGCTCGCACAACAGCCGCAGCACGTCTGACGACCTCGGCAGCCAGGTGGGGGCCCGGGGCCACGCGGCGTCCAGCAGCAGCCCGGACGAATCGGCCGGCCGGCGGAGCGCGCACAGCGAGGACTGCTCCACGCCGCGCCGCCACCACGCCGCGCCGCCGCCACGACGACCTACCGTCCACGGCGGTGCCACGGCGATCGCGATCCCCCGCCAGAGCACGACGGCGGGAACAGCCCACATCCTGAAGGTGGAGCagcagagcagaggaggaggctTGGCCGGGGCCAGGACGCcgcgctctctccctctcagcgCCTCGctacgcagcagcagcagcgctaaCACGGAGCCCGCCCCCACGCCCACGCCAGGCCACGCCAGCCGCCAACAGCACGCCGGACTCGTGGAGAACGCGGCTCCGCCTCCGAGGAGCGCCGCCAAGACGCCGCAGCAGGTGGCGTCTCCGGTGGAGGCGGCAGCGGTCGTCGTGGCGATGTCCCCGGTGGAGCGCACGGCTGCCTGGGTGCTGAACAACGGCCAGtacgaagaggaggaggaggaggaggaggaggaagaggaggaggggggagagaggagcagGGAGGAGGGCAGGAACACTGAGAAGTATGAGCTGGAGATCTCGCGGCTCAAGGAGCGCCTGCGTGCGTCCGGGCGGCGTCTAGAGGAGTACGAGCGGCGCCTGGCGGCTCAGGAGCAGCAGATGGAGAAGCTGCTGCTGGAGTACAAGCACCGCCTGGAGGACAGCGAGGAGAGGCTGCGGAGGCAGCAGGAGGAGAAGGACAGCCAGATGAAGAGCATCATCTGCAGgctgaTGGCGGTGGAGGACGAGTTAAAGCGGGACCACGCTGAGATGCAGGCTGTGATTGAAGCCAAACAGAAGATCATCGACGCTCAGGAGCGGCGGATCATGTCCCTGGACGCGGCGAACTCGCGGCTGATGGCGGCGCTGACTCAGGTGAAGGAGCGCTACAGCGCGCCCAACCTCCGCAACGGCCTGTCACCCAGCAACCCCACCAAACTGTCCATCACTGAGAACGGAGAGTTCAAGAACAGCAGCTGCTGATTGGCCGCCGGGACGCCGAGAGGCGGGGCTTAAACTCTTAAAGCTGCAGAGACAGAATGTATAAATACGAGTGTAAATACTGAAGGTTTGatctgttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcacagaagCACAGTGAGAAcgaaacaaaccaaaaaactaaaaacgcactcaagtttttttgtttttttaactgacTTTTTTTGGTTGCTGTTGAAGTTGATTTCATTTTTTAGAGTGGAGTTTTTTTACCTGACGAGCTgttgttttttggggtttttaatTTATTGCTCCACGTCTCGTTGCTGATCTACTgaaccccccccctctcctgtAGGatcagggtcaaaggtcacacaCCCCCCCTGTCTGCTGTTccaccttcacaataaaagctgcCTGATAGA

Function

NR:

description
ras GTPase-activating protein nGAP isoform X9

GO:

id name namespace
GO:0006376 mRNA splice site selection biological_process
GO:0000245 spliceosomal complex assembly biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150106 False 1322 lncRNA 0.52 2 2787783 2789124
XM_039816303.1 True 2473 mRNA 0.64 11 2787779 2826854

Neighbor

gene id symbol gene type direction distance location
LOC120568826 LOC106675582 coding upstream 53881 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 98563 2665824 ~ 2689216 (+)
LOC120568517 NA coding upstream 322939 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 565888 2221448 ~ 2221891 (+)
LOC120567900 NA coding upstream 608176 2179109 ~ 2179603 (+)
ptmab NA coding downstream 472010 3298864 ~ 3304226 (+)
LOC120568524 NA coding downstream 769561 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 888712 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 977044 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 988966 3815820 ~ 3825434 (+)
G111461 NA non-coding upstream 15541 2768804 ~ 2772238 (+)
G111455 NA non-coding upstream 45479 2737616 ~ 2742300 (+)
G111428 NA non-coding upstream 132346 2654873 ~ 2655433 (+)
G111401 NA non-coding upstream 231767 2555391 ~ 2556012 (+)
G111389 NA non-coding upstream 233004 2501893 ~ 2554775 (+)
G111448 NA non-coding downstream 16849 2843703 ~ 2889240 (+)
G111469 NA non-coding downstream 64304 2891158 ~ 2891458 (+)
G111471 NA non-coding downstream 70470 2897324 ~ 2897840 (+)
G111475 LOC101473605,LOC102292558 non-coding downstream 83695 2910549 ~ 2931445 (+)
G111478 NA non-coding downstream 87604 2914458 ~ 2930622 (+)
LOC120568825 NA other upstream 36207 2742424 ~ 2751572 (+)
G111404 NA other upstream 119841 2565135 ~ 2667938 (+)
G111388 NA other upstream 209848 2577121 ~ 2577931 (+)
LOC120568516 NA other upstream 347436 2439709 ~ 2440343 (+)
LOC120568515 NA other upstream 487899 2282608 ~ 2299880 (+)
G111484 NA other downstream 104785 2931639 ~ 3066029 (+)
G111486 LOC107102160,LOC102799505,LOC103352980 other downstream 111295 2938149 ~ 2940848 (+)
G111494 NA other downstream 190104 3016958 ~ 3075901 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other downstream 561200 3388054 ~ 3399183 (+)
LOC120568331 NA other downstream 664735 3491589 ~ 3506128 (+)

Expression


Co-expression Network