G111484


Basic Information

Item Value
gene id G111484
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2931639 ~ 3066029 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150150
ctgtctctgtgtgtgtgtgtgtgtttgtgtctctgtgtgtgcgtctttgtgtgtgtgtgtttgtgtgctgtgtatgtgtctccgtgtgtgtgtatgtttgtgtgtgtgtgtgtgtgtatgtttgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtctccgtgtgtgtgtgtgtctgtgtgtgtgtgtttgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtatgtctgtgtgtgtgtgtgtctgtgtgtgtgtctttgtgtatgtctgtg
>TU150152
gtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgcgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
>TU150153
ctgtctctgtgtgtgtgtgtgtgtttgtgtctctgtgtgtgcgtctttgtgtgtgtgtgtttgtgtgctgtgtatgtgtctccgtgtgtgtgtatgtttgtgtgtgtgtgtgtgtgtatgtttgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtctccgtgtgtgtgtgtgtctgtgtgtgtgtgtttgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgcgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtttgtgtctctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgat

Function

NR:

description
PREDICTED: complement C4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150150 False 362 lncRNA 0.47 3 3020593 3066029
TU150152 False 316 lncRNA 0.50 3 2931639 3061507
TU150153 True 539 TUCP 0.48 3 3020593 3021258

Neighbor

gene id symbol gene type direction distance location
LOC120568826 LOC106675582 coding upstream 197741 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 242423 2665824 ~ 2689216 (+)
LOC120568517 NA coding upstream 466799 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 709748 2221448 ~ 2221891 (+)
LOC120567900 NA coding upstream 752036 2179109 ~ 2179603 (+)
ptmab NA coding downstream 232835 3298864 ~ 3304226 (+)
LOC120568524 NA coding downstream 530386 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 649537 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 737869 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 749791 3815820 ~ 3825434 (+)
G111475 LOC101473605,LOC102292558 non-coding upstream 194 2910549 ~ 2931445 (+)
G111478 NA non-coding upstream 1017 2914458 ~ 2930622 (+)
G111483 NA non-coding upstream 4491 2924392 ~ 2927148 (+)
G111471 NA non-coding upstream 33799 2897324 ~ 2897840 (+)
G111469 NA non-coding upstream 40181 2891158 ~ 2891458 (+)
G111501 NA non-coding downstream 4537 3070566 ~ 3145702 (+)
G111506 NA non-coding downstream 33366 3099395 ~ 3107381 (+)
G111508 NA non-coding downstream 47908 3113937 ~ 3114442 (+)
G111512 NA non-coding downstream 51655 3117684 ~ 3118187 (+)
G111513 NA non-coding downstream 62077 3128106 ~ 3128413 (+)
rasal2 NA other upstream 104785 2787779 ~ 2826854 (+)
G111452 NA other upstream 107051 2816944 ~ 2824588 (+)
LOC120568825 NA other upstream 180067 2742424 ~ 2751572 (+)
G111404 NA other upstream 263701 2565135 ~ 2667938 (+)
G111388 NA other upstream 353708 2577121 ~ 2577931 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other downstream 322025 3388054 ~ 3399183 (+)
LOC120568331 NA other downstream 425560 3491589 ~ 3506128 (+)
LOC120568327 LOC102295145 other downstream 434650 3500679 ~ 3525115 (+)
LOC120568521 NA other downstream 474958 3540987 ~ 3852034 (+)
G111848 NA other downstream 1022615 4088644 ~ 4137543 (+)

Expression


Co-expression Network