G111486 (LOC107102160,LOC102799505,LOC103352980)


Basic Information

Item Value
gene id G111486
gene name LOC107102160,LOC102799505,LOC103352980
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2938149 ~ 2940848 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150157
gAGTCCAGTCTGCGGTGTCTCCTGGACGTCCTGACCAGCTCCTCGTCCACCCCCACCCAGCACCTGGAGCAGAAACAGTCTCTGGCTCGCCAGTTCGCCCACATCCTGCACTTCACGCTGCGCTTCGACGAACTCAAGATGACCAACCCGGCCATCCAGAACGACTTCAGCTACTACCGCAGAACCATCAGCCGCATGCGGATCAACAACCTGTCTGCCGACGCAGGAAATGAGGTCAACAACGAGATGGCCAATAGGATGTCTCTGTTCTACGCCAGCGCCACGCCCATGCTGAAGACGCTAAGTGACGCCACGTCAAAGTTTGTCTCAGATAATCCAGACGTCCCGATCGAGAA

Function

NR:

description
PREDICTED: protein FAM49B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150157 True 356 TUCP 0.57 4 2938149 2940848

Neighbor

gene id symbol gene type direction distance location
LOC120568826 LOC106675582 coding upstream 204251 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 248933 2665824 ~ 2689216 (+)
LOC120568517 NA coding upstream 473309 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 716258 2221448 ~ 2221891 (+)
LOC120567900 NA coding upstream 758546 2179109 ~ 2179603 (+)
ptmab NA coding downstream 358016 3298864 ~ 3304226 (+)
LOC120568524 NA coding downstream 655567 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 774718 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 863050 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 874972 3815820 ~ 3825434 (+)
G111475 LOC101473605,LOC102292558 non-coding upstream 6704 2910549 ~ 2931445 (+)
G111478 NA non-coding upstream 7527 2914458 ~ 2930622 (+)
G111483 NA non-coding upstream 11001 2924392 ~ 2927148 (+)
G111471 NA non-coding upstream 40309 2897324 ~ 2897840 (+)
G111469 NA non-coding upstream 46691 2891158 ~ 2891458 (+)
G111476 NA non-coding downstream 1927 2942775 ~ 2948485 (+)
G111487 NA non-coding downstream 11760 2952608 ~ 2955109 (+)
G111495 NA non-coding downstream 82193 3023041 ~ 3025573 (+)
G111485 NA non-coding downstream 105637 3046485 ~ 3098747 (+)
G111498 NA non-coding downstream 106091 3046939 ~ 3047847 (+)
rasal2 NA other upstream 111295 2787779 ~ 2826854 (+)
G111452 NA other upstream 113561 2816944 ~ 2824588 (+)
LOC120568825 NA other upstream 186577 2742424 ~ 2751572 (+)
G111404 NA other upstream 270211 2565135 ~ 2667938 (+)
G111388 NA other upstream 360218 2577121 ~ 2577931 (+)
G111494 NA other downstream 76110 3016958 ~ 3075901 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other downstream 447206 3388054 ~ 3399183 (+)
LOC120568331 NA other downstream 550741 3491589 ~ 3506128 (+)
LOC120568327 LOC102295145 other downstream 559831 3500679 ~ 3525115 (+)
LOC120568521 NA other downstream 600139 3540987 ~ 3852034 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location