G111519


Basic Information

Item Value
gene id G111519
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3158512 ~ 3214758 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150199
GCTGTATCTTCAAAGCCTGGAGTGTCAACAATGGTCAGTGAGTAGTTGATTTTAAAACCATCCTGGTGGTTGATTTTGTACACAGTGACTTCAGAGGTCTGACTTTCAGCTTGTGATCTCGACTGATCCTCATCAATTAATTTGAATCTGAAACTGTCCTTCCATTCTACACCAACTATGTAGTTGATCATTGCATTGATCAGAGTGGACTTTCCTGATCTGGTCACCCCGAAAAGCATTATAGTGCGATTTTGCTTTGTGCTTTCTTTGCCAAAACTGAATCTTCGGCATCCACCGATGTTCATATCTTCTTCTGTCAGAGTCAGTTTGTAAACTGATGGTGAATCAGAATTCATCCTTTTGCTTGTACTTCTGAGGGATTCTGTTAGCGTAAACTTTGTTGTGCGGACGTTAACAGGGATGCTTTCTTTGCTTCTGCCAGCTTCACCACAATCACATCTGACCCTGACAACATATTCTGTCTCTGACTGAAGCTCTGATATTATTGCCTTTTCAGCTCCTGCCATCATTTCATTCCATTGGAGATCTTCCTCTTTCATCCCGTTGTCTGTTTTGGCGTACTCCACGATGTAGCTCAAAATGTGGACATCTTGTCCAAGCTCAGCAGGTTTCTCCCAGCTAACAGATATCTCTCTTGAGTTTGGTTCAACTCGAGGTTTTCCAGGAGGGCTGCAAGGTAACGTTTTAGTGGAACCACTGACTTCATTGGCTGGCCCAACACCTACTGAGGTCACTGCTCTGCATCTGAACATATACTCTGTGTTCGGACTCAGATCGCTCACTGTGACTTCTTCAGCTTTTGATGCTGTCTTCTGTTTccatccatcctctccactgACACAGTACTCAACAGAGTAGGAGGTGATGTCCTCTGCTCCAAATCTGGGTGGAGAAACCTTCAGAGTCACACTGTTGTGGTCTATATCACTTACTGTCACTGTTTCAGGCTTTGATGGCGGCTCAAAGTTCTCATTGATAGAATTGCCTTTTTGATAAAGGTAGATGCTTGAACCTTTCTGTGTCTCATTTGTTGAACCCGCTGTCAGGAACTTAATCTTCTTGTTCTCCTTGTTGGCCTCTGCAAAGTCACTGAAGAGCTTTGCTTTACACCACATTTCTTCTGATGCTGTTTTTGAGGTGTACCATTGTTCCTTCTCTACATCGTAAATATGTGTATCTTGAGGGTCTTCTGGTGTTTGTTTTAAGTAGTTTGATAAAGCTGAGAGGTACGGTTCAGCACTTCCAATTGAGGtgaagacaaaacacacagcatgGTCTGCACTGAGACTTTCTTTGTACAGATGATTTTGAGATGGA
>TU150200
AAagaaacttaaaaatgtaacaaaaggcTGATATTACGGTTTAAAAACCTGAATTTAACAATGTAAATACAAATGTTCAGGTTTGCAGAGATAGGGCTGCAGACTTATACATTGGTGGTAATGGTGACAGAAAGTTAATGGTCCAAAAACTAAATGTGGTCACACTTAAATATTTATCATCACACATGTTATTCTGTGTTTCCCTTTTATCtatcttttatgtttttctttattatctGTGTCAGAATGGATCTCCTCTTTGTCTTGGATGTTAAAGATTAATAAGACTTATACCGATCGCTCCAAGAAAACTGTGATAACGTCTATCTATGATGGTCAAGAACTGAACTCGTTGCTcccagcctggcttggcctcaGATTTCTCTCCCTCAATAAGCATGTCAATGTACTGGTCAGTAGAGAGAGGATCTGACTTCAGTGTTTTCTCTTTAAGTTTGTTGAAACACTCAGTAGATCTCTCTATCAGTGTGTTCACCTCAGACATCGTAGGAAAATATTCAGTTGTCCCTCTTATCTCCTCAAGCTTGGCTAGCCCAGTTTTAACCTGCTTGTGCAAATCTTCATATGACTTCTCAAactgctctctttctctgagGACGTTTTTCGTCATTGTCAAGCTTTTGGTGTCTatgacattcaaagcaacaAAGAACCTCTTCATGCCTTTTGTCCCCATGTTCCAAAACATCTGATCAAAtcctccatcatcatcatcatactcACTCATGCTGTCTGCTGCAGATGATGTGTTGTCTGCAAACAACGCTGAATTATTGAATTTGAAGTGAACTGGAAGCCCGTCTTTTGTTTTAGGACATGGGACACCTGAAGCAGTGATTGCCTCTAGAACTGGTGGTTGCTGGCTGTCTGCAGATGTCACCAGAACCCGGATTTTTCTGCCACATCTTTGCCAAAGATTGAGAGCAGATAATCCAACAAACATTTCTGTGATGATGTGAGTCGTGCTAAAGCAGACTGAGCTACGAAACACACAGCGTCAATTTCACTGAAACACTCAGCAGAGAAGAGATTGCGTGCAGATGTGCAATGATCTCCTCGTCTCTTTCTATGCCTCCTGTATCTTCAAAGCCTGGAGTGTCAACAATGGTCAGTGAGTAGTTGATTTTAAAACCATCCTGGTGGTTGATTTTGTACACAGTGACTTCAGAGGTCTTGCTTTTAGCTTGTGATCTCGACTGATGCTTGTCAATTAATTTGAATCTGAAACTGTCCTTCCATTCTACACCAACTATGTAGTTGATCATTGCATTGATCAGAGTAGACTTTCCTGATCCGGTCACCCCAAAAAGCATTATAGTGCGATTCtgccttctgctttctttgccaAAACTGACTCTTCGGCATCCACCGATGTTCATATCTTCTTCTGTCAGAGTCAGTTTGTAAACTGATGGTGAATCAGAATTCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150199 False 1338 lncRNA 0.43 3 3184555 3214758
TU150200 True 1452 lncRNA 0.40 2 3158512 3184911

Neighbor

gene id symbol gene type direction distance location
LOC120568826 LOC106675582 coding upstream 424614 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 469296 2665824 ~ 2689216 (+)
LOC120568517 NA coding upstream 693672 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 936621 2221448 ~ 2221891 (+)
LOC120567900 NA coding upstream 978909 2179109 ~ 2179603 (+)
ptmab NA coding downstream 84106 3298864 ~ 3304226 (+)
LOC120568524 NA coding downstream 381657 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 500808 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 589140 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 601062 3815820 ~ 3825434 (+)
G111501 NA non-coding upstream 12810 3070566 ~ 3145702 (+)
G111515 NA non-coding upstream 24313 3133854 ~ 3134199 (+)
G111513 NA non-coding upstream 30099 3128106 ~ 3128413 (+)
G111512 NA non-coding upstream 40325 3117684 ~ 3118187 (+)
G111508 NA non-coding upstream 44070 3113937 ~ 3114442 (+)
G111536 NA non-coding downstream 93674 3308432 ~ 3308677 (+)
G111537 NA non-coding downstream 100297 3315055 ~ 3375620 (+)
G111538 NA non-coding downstream 104865 3319623 ~ 3354675 (+)
G111539 NA non-coding downstream 123848 3338606 ~ 3339276 (+)
G111546 phb2,LOC103352978,LOC106568660 non-coding downstream 134361 3349119 ~ 3361990 (+)
G111494 NA other upstream 82611 3016958 ~ 3075901 (+)
G111484 NA other upstream 92483 2931639 ~ 3066029 (+)
G111486 LOC107102160,LOC102799505,LOC103352980 other upstream 217664 2938149 ~ 2940848 (+)
rasal2 NA other upstream 331658 2787779 ~ 2826854 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other downstream 173296 3388054 ~ 3399183 (+)
LOC120568331 NA other downstream 276831 3491589 ~ 3506128 (+)
LOC120568327 LOC102295145 other downstream 285921 3500679 ~ 3525115 (+)
LOC120568521 NA other downstream 326229 3540987 ~ 3852034 (+)
G111848 NA other downstream 873886 4088644 ~ 4137543 (+)

Expression


Co-expression Network