LOC120567769 (LOC102296991,LOC102211951,LOC102799200,LOC101465856)


Basic Information

Item Value
gene id LOC120567769
gene name LOC102296991,LOC102211951,LOC102799200,LOC101465856
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3388054 ~ 3399183 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150236
GTGACCTTGACGTGCGTACTTCTTCACTGGTTTTCTGACAGACGAAGAGCATGGCGAATAAAGATCCCGGTGGTTTCCTGCAGCAGCTGCGGCAGATAGCAGCCAGGATGTCGGCAGGATCTCGGGGCGCAGGAATCGGACTCAAACTCCTGATCGGTGCTGGAGCGCTGGCTTACGGAGTCAAGGAAGCAAcatacacagTTGAAGGAGGACAGCGAGCGATCATCTTCAACAGGATCGGAGGCATGCAGATGGACACGCTTCTCTCCGAGGGACTCCACTTCAGGATGCCCTGGTTCCAGTATCCTGTCATCTATGACATCAGAGCCAGACCCAGAAAGATCTCCTCGCTCACTGGAAGCAAAGCGttctttccttccctttctCCTACACTACCATCCTTCCTACTGTCTTCTTTCCATCCTTg
>XM_039814780.1
tcccatgctGCCCAGCGCACACGGAAGTACGTCATCAAGCGTGACCTTGACGTGCGTACTTCTTCACTGGTTTTCTGACAGACGAAGAGCATGGCGAATAAAGATCCCGGTGGTTTCCTGCAGCAGCTGCGGCAGATAGCAGCCAGGATGTCGGCAGGATCTCGGGGCGCAGGAATCGGACTCAAACTCCTGATCGGTGCTGGAGCGCTGGCTTACGGAGTCAAGGAAGCAAcatacacagTTGAAGGAGGACAGCGAGCGATCATCTTCAACAGGATCGGAGGCATGCAGATGGACACGCTTCTCTCCGAGGGACTCCACTTCAGGATGCCCTGGTTCCAGTATCCTGTCATCTATGACATCAGAGCCAGACCCAGAAAGATCTCCTCGCTCACTGGAAGCAAAGGTCagaccctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtcgtaataaaatagtaaataa

Function

NR:

description
PREDICTED: prohibitin-2-like isoform X1

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150236 False 427 TUCP 0.53 5 3388094 3399183
XM_039814780.1 True 510 mRNA 0.53 4 3388054 3398106

Neighbor

gene id symbol gene type direction distance location
ptmab NA coding upstream 83828 3298864 ~ 3304226 (+)
LOC120568826 LOC106675582 coding upstream 654156 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 698838 2665824 ~ 2689216 (+)
LOC120568517 NA coding upstream 923214 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 1166163 2221448 ~ 2221891 (+)
LOC120568524 NA coding downstream 197232 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 316383 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 404715 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 416637 3815820 ~ 3825434 (+)
vcpip1 vcpip1,LOC102795816 coding downstream 537448 3936631 ~ 3949566 (+)
G111553 NA non-coding upstream 2692 3383917 ~ 3385362 (+)
G111537 NA non-coding upstream 12434 3315055 ~ 3375620 (+)
G111550 NA non-coding upstream 15861 3371897 ~ 3372193 (+)
G111546 phb2,LOC103352978,LOC106568660 non-coding upstream 26064 3349119 ~ 3361990 (+)
G111538 NA non-coding upstream 33379 3319623 ~ 3354675 (+)
G111719 NA non-coding downstream 5883 3405066 ~ 3405325 (+)
G111720 NA non-coding downstream 7262 3406445 ~ 3406673 (+)
G111723 NA non-coding downstream 20241 3419424 ~ 3419891 (+)
G111727 NA non-coding downstream 40005 3439188 ~ 3439413 (+)
G111728 NA non-coding downstream 40983 3440166 ~ 3441079 (+)
G111494 NA other upstream 312153 3016958 ~ 3075901 (+)
G111484 NA other upstream 322025 2931639 ~ 3066029 (+)
G111486 LOC107102160,LOC102799505,LOC103352980 other upstream 447206 2938149 ~ 2940848 (+)
rasal2 NA other upstream 561200 2787779 ~ 2826854 (+)
G111452 NA other upstream 563466 2816944 ~ 2824588 (+)
LOC120568331 NA other downstream 92406 3491589 ~ 3506128 (+)
LOC120568327 LOC102295145 other downstream 101496 3500679 ~ 3525115 (+)
LOC120568521 NA other downstream 141804 3540987 ~ 3852034 (+)
G111848 NA other downstream 689461 4088644 ~ 4137543 (+)
G111850 LOC102799398 other downstream 691325 4090508 ~ 4138933 (+)

Expression


Co-expression Network