G111579


Basic Information

Item Value
gene id G111579
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2732552 ~ 2750754 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150321
ACATCCTCAAAGTAGCTCAGAGGACTgatatggatgctggatgctgattggctgagtggtgacagtgaggggtagttgtgtagaaactggttgtgatcctctgtgtgtgagagcttcttcagctcagcgtctttcctcttcagctcagtgatctcctgctccagcttctcctgaagctctgactcgactcacttcacttttctgctgggatctgacctgctgcttcacatcagagcttcttcagctcagcgtctttcctcttcagctcagtgatctcctgctccagcttctcctgaagctctctgactcgactcacttcacttttctgctgggatctgacctgctgctccacatcagagcttcttttctccaggagacggatcagctcagtgaagatcttctcgctgtcctccactgctttatcagcAGAGTCATTGATCGCCTCTACAtgctgttgaagcagcttcacatctttctctcggtcctggattctctgctggatgtttaGTCGACTCCCCTCAAgctttttctgcctctcagtcctttctgctgcagcagagactgtgtcgtggcctttatgttcatccacagagcagagataacagataagctgctgatcagtacgacagaaaatcttcatcacctcatcatgacgagagcagatattctcctggagcttcttggagggctccaccagcttgtgtttctttaatGGAGGAACATCATAATGAGGCTGGAGGTGTTGATCACAGTAAGAGGCCAAACAGACCAGACAGGACTTCTGTGCTTTTAGTTTTCTCCCAGTGCAGAAATCACAGGCtacatcttcagctccagcatagcagtgatcagcaggagcagcttggagtccagtcttcttcagctcctccactaaatctgctaacatggtgtttttcagcaggacaggcctcggtgtgaacGTCTGCTTGCactgaggacagctgtggatgttctTATGATCCTCTTCATCccagtggcttttaatacagttcatgcagtagctgtgtccacagggagtagacaccggatccttcagtagatccagacagatggaagaAGAGAAGGTCTCCTggtccagctgaactcctttctgcgccatttcacctctctGACAATGACTATCTGACTGCATGTTTTCTGTGACTGCTTTATCAAGTGTCCCATGTTCAAGGTTCAGCTGTATTG
>TU150322
cgtcgttcctcttcagctcagtgatctcctgctccagcttctcctgaagctctttgactcgactcacttcacttttctgctgggatctgacctgctgcttcacatcagtgcttcttttctccaggagacggatcagctcagagaagatcttctcgctgtcctccactgctttatcagcAGAGTCATTGATAACCTCCACCTGCTCTCGAAGCagtttcacatctttctctcggtcgtggattctctgctggatgtttaGTCGACTCCCCTCAAgctttttctgcctctcagtcctttctgctgcagctgagactgtgtcgtggcctttatgttcatccattaagcagagataacagataagctgctgatcagtacgACAGAAAAActtcatcacctcatcatgacgagagcagatgttctcctggagcttcttggagggctccaccagcttgtgtttctttaatGGAGGAACATCATAATGAGGCTGGAGGTGTTGATCACAGTAAGAGGCCAAACAGACCAGACATGACTTGATGGCTTTTAGTTTTCTCCCAGTGCAGaaatcacaggccacatcttcagctcctGCATAGCAatgatcagcaggagcagcttggagtccagtcttcttcagctcctccactaaatctgctaacatggtgtttttcaacaggacaggcctcggtgtgaacGTCTGCCTGCactgaggacagctgtggatgttctTATGATCCTCTCCATCccagtggcttttaatacagttcatgcagtagctgtgtccacaggAAGTAGTCACCGGATCTTTCAatagatccagacagatggaacaagagaaggtCTCCTggtccagctgaactcctttctgcgccatttcacctctctGTGACAGCGTCT
>TU150324
cgtcgttcctcttcagctcagtgatctcctgctccagcttctcctgaagctctttgactcgactcacttcacttttctgctgggatctgacctgctgcttcacatcagtgcttcttttctccaggagacggatcagctcagagaagatcttctcgctgtcctccactgctttatcagcAGAGTCATTGATAACCTCCACCTGCTCTCGAAGCagtttcacatctttctctcggtcgtggattctctgctggatgtttaGTCGACTCCCCTCAAgctttttctgcctctcagtcctttctgctgcagctgagactgtgtcgtggcctttatgttcatccattaagcagagataacagataagctgctgatcagtacgACAGAAAAActtcatcacctcatcatgacgagagcagatgttctcctggagcttcttggagggctccaccagcttgtgtttctttaatGGAGGAACATCATAATGAGGCTGGAGGTGTTGATCACAGTAAGAGGCCAAACAGACCAGACATGACTTGATGGCTTTTAGTTTTCTCCCAGTGCAGaaatcacaggccacatcttcagctcctGCATAGCAatgatcagcaggagcagcttggagtccagtcttcttcagctcctccactaaatctgctaacatggtgtttttcaacaggacaggcctcggtgtgaacGTCTGCCTGCactgaggacagctgtggatgttctTATGATCCTCTCCATCccagtggcttttaatacagttcatgcagtag
>TU150325
cgtcgttcctcttcagctcagtgatctcctgctccagcttctcctgaagctctttgactcgactcacttcacttttctgctgggatctgacctgctgcttcacatcagtgcttcttttctccaggagacggatcagctcagagaagatcttctcgctgtcctccactgctttatcagcAGAGTCATTGATAACCTCCACCTGCTCTCGAAGCagtttcacatctttctctcggtcgtggattctctgctggatgtttaGTCGACTCCCCTCAAgctttttctgcctctcagtcctttctgctgcagctgagactgtgtcgtggcctttatgttcatccattaagcagagataacagataagctgctgatcagtacgACAGAAAAActtcatcacctcatcatgacgagagcagatgttctcctggagcttcttggagggctccaccagcttgtgtttctttaatGGAGGAACATCATAATGAGGCTGGAGGTGTTGATCACAGTAAGAGGCCAAACAGACCAGACATGACTTGATGGCTTTTAGTTTTCTCCCAGTGCAGaaatcacaggccacatcttcagctcctGCATAGCAatgatcagcaggagcagcttggagtccagtcttcttcagctccagcatagcagtgatcagcaggagcagcttggagtccagtcttcttcagctcctccactaaatctgctaacatggtgtttttcagcaggacaggcctcggtgtgaacGTCTGCTTGCactgaggacagctgtggatgttctTATGATCCTCTTCATCccagtggcttttaatacagttcatgcagtagctgtgtccacagggagtagacaccggatccttcagtagatccagacagatggaagaAGAGAAGGTCTCCTggtccagctgaactcctttctgcgccatttcacctctctGACAATGACTATCTGACTGCATGTTTTCTGTGACTGCTTTATCAAGTGTCCCATGTTCAAGGTTCAGCTGTATTG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
TU150321 True 1206 lncRNA 0.49 3 2732552 2742579
TU150322 False 894 lncRNA 0.49 2 2741557 2750754
TU150324 False 773 lncRNA 0.48 2 2737207 2750754
TU150325 False 1009 lncRNA 0.48 3 2732552 2750754

Neighbor

gene id symbol gene type direction distance location
lamc2 NA coding downstream 4006 2703359 ~ 2728546 (-)
smg7 smg7 coding downstream 69787 2625838 ~ 2662765 (-)
lamc1 lamc1,LOC103398751 coding downstream 131075 2518851 ~ 2601477 (-)
LOC120568497 NA coding downstream 968407 1756621 ~ 1764145 (-)
LOC120567872 NA coding downstream 1297277 1433235 ~ 1435275 (-)
LOC120568009 NA coding upstream 99271 2850025 ~ 2852388 (-)
LOC120568013 NA coding upstream 104169 2854923 ~ 2857623 (-)
LOC120568010 NA coding upstream 108820 2859574 ~ 2863734 (-)
LOC120568007 NA coding upstream 116501 2867255 ~ 2889739 (-)
LOC120568008 NA coding upstream 127393 2878147 ~ 2880316 (-)
G111600 NA non-coding downstream 59459 2665857 ~ 2673093 (-)
G111576 NA non-coding downstream 96636 2561765 ~ 2635916 (-)
G111577 NA non-coding downstream 113840 2616190 ~ 2618712 (-)
G111575 NA non-coding downstream 176289 2555406 ~ 2556263 (-)
G111574 NA non-coding downstream 177733 2554423 ~ 2554819 (-)
G111611 NA non-coding upstream 617 2751371 ~ 2757338 (-)
G111615 NA non-coding upstream 18081 2768835 ~ 2772246 (-)
G111578 NA non-coding upstream 28728 2779482 ~ 2887881 (-)
G111590 NA non-coding upstream 33155 2783909 ~ 2789273 (-)
G111591 NA non-coding upstream 33764 2784518 ~ 2827156 (-)
G111573 NA other downstream 154538 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 327459 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 988713 1743300 ~ 1743839 (-)
G111226 NA other downstream 1314593 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 1323024 1391808 ~ 1409528 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 147461 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 453533 3204287 ~ 3229147 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other upstream 563892 3314646 ~ 3371775 (-)
LOC120569104 NA other upstream 694646 3445400 ~ 3456534 (-)
G111942 NA other upstream 753744 3504498 ~ 4036963 (-)

Expression


Co-expression Network