G111609



Basic Information


Item Value
gene id G111609
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2738348 ~ 2751777 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU150356
ACCCATGATGTGGAAgagaaacaacaacatacaaatacatagaTACAAATATTCATCAAACATTTAGAGAGCAGAGAAGTTTTCATTCTCAGTTCAGGTCAACAAACATCATCATGAGCAGTGATAGCCTCCGTGGCTAAACAGACACAGGAAGGAGCACCACCTAAATaaactcaaacatttacacaacaaCTAATGACCAGATGCCAAAGGACATCCCATAAtgtttgactgacagctgatCTCTGTGCAGTGAAGAAATGTCACAACAATCATCTCTCAGCAACAAACATGAAGACTAAATAAGTTGAAGAGTTAAAACAGAGATTAACCCTAAATGACTTCagtctatttcagtttacacaaaaCAGCAGACTCTCCAGGAGAAAAATTAAACCTTAGTCCAGCATAgagcggctgagtgaatgtggtctggactctgtggaggagagtcatggtttcagagactctgtagaaggacagaatacctgcactgtgatccaggtacactcctactctggaggacacAGGACCTGAGACGGGATTTCGGACATTGTTGTAATAAAAGCAACTGCTACTGTCTAAAGCCCAGGATTTGTTATTTCGTCCAAATCCACATTCAGTCGAcccccctgctctgctgatattcttgtatgcAACTGCTACGAAATCCGTTACCTCTcttctccacctcccagtaacaacgtccagtcagactctctctactcaggacctgaggCCATAcagtgaatctgtctgggtgactagaataagaCTGTTGTTGTCTCATTACTGTTGCTTTtctgttcccctcagataataacagctgtgtgtgtgctgtgtttggatccagtgtgatttcCCGTGAATATTGTAAGAATTCAACTCTGGTCTTGGGCTCTTGTTGTgacttt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU150356 True 914 lncRNA 0.42 2 2738348 2751777

Neighbor


gene id symbol gene type direction distance location
lamc2 NA coding downstream 9802 2703359 ~ 2728546 (-)
smg7 smg7 coding downstream 75583 2625838 ~ 2662765 (-)
lamc1 lamc1,LOC103398751 coding downstream 136871 2518851 ~ 2601477 (-)
LOC120568497 NA coding downstream 974203 1756621 ~ 1764145 (-)
LOC120567872 NA coding downstream 1303073 1433235 ~ 1435275 (-)
LOC120568009 NA coding upstream 98248 2850025 ~ 2852388 (-)
LOC120568013 NA coding upstream 103146 2854923 ~ 2857623 (-)
LOC120568010 NA coding upstream 107797 2859574 ~ 2863734 (-)
LOC120568007 NA coding upstream 115478 2867255 ~ 2889739 (-)
LOC120568008 NA coding upstream 126370 2878147 ~ 2880316 (-)
G111600 NA non-coding downstream 65255 2665857 ~ 2673093 (-)
G111576 NA non-coding downstream 102432 2561765 ~ 2635916 (-)
G111577 NA non-coding downstream 119636 2616190 ~ 2618712 (-)
G111575 NA non-coding downstream 182085 2555406 ~ 2556263 (-)
G111574 NA non-coding downstream 183529 2554423 ~ 2554819 (-)
G111615 NA non-coding upstream 17058 2768835 ~ 2772246 (-)
G111578 NA non-coding upstream 27705 2779482 ~ 2887881 (-)
G111590 NA non-coding upstream 32132 2783909 ~ 2789273 (-)
G111591 NA non-coding upstream 32741 2784518 ~ 2827156 (-)
G111620 NA non-coding upstream 49223 2801000 ~ 2801460 (-)
G111573 NA other downstream 160334 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 333255 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 994509 1743300 ~ 1743839 (-)
G111226 NA other downstream 1320389 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 1328820 1391808 ~ 1409528 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 146438 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 452510 3204287 ~ 3229147 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other upstream 562869 3314646 ~ 3371775 (-)
LOC120569104 NA other upstream 693623 3445400 ~ 3456534 (-)
G111942 NA other upstream 752721 3504498 ~ 4036963 (-)

Expression



Co-expression Network