G111626 (LOC104959728)


Basic Information

Item Value
gene id G111626
gene name LOC104959728
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2843728 ~ 2847386 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150375
CACTACTCTCTGATTGCTGATGTCCCTGCTGGTTGACGTTTTGTGTTTAGACTTGTATGTGGTTGGAGGTTGAGGACCTTAGTGGGTGTAACCAACGAGGTGAAATCAGAGCTGACCGGCCCCGTTGACTGCAGAAACACATGCTGTTCAGAACAGGCGTTGTCACTGAGAACAGAAATGGCgcagaaaggagttcagctggacAGGGAGaccttctcttgttccatctgtctggatctactgaaggatccggtgactacttcctgtggacacagctactgcatgaactCTATTAAAAGCCACTGGGATAAAGAGGATCATAagaacatccacagctgtcctcagtGCAGGCAGACGTTCAGACcgaggcctgtcctgctgaaaaacaccatgttagtAGATCACTGCTCATGATGTTTGTTGACCTGAACTGAGAATGAAAACTGACTATTTTataccagcttgtgtttctttagtTGGGGAACATCATAATGAGGCTGGAGGTGTTGATCACAGTAAGACATCAGACACCTCAAACAGGACTTGATGGCTTTCAGTTTTCTCccagtgcagacatcacaggctACATCTTCAGCTCCtgcatagcagtgatcagcaggagcagcttggagtccagtcttcttcagctcctccactgaTATCCTGAAGGAGCGTCACCTAAAgaaactcaaacatttacacaactAATGACAAGATGTCAAAGGACATCCCATagtttgactgacagctgatCTCTGTTCAGTGGAGAAATGCCACACCAATCAGCTCTCAGCAACCAACATGGAGACTAAATAAGCTGAATAGTGGTTCCATTATAGTTATTATAGCTCTGCTGATCTTCTTGTATGAGACTGCTACATAAAtgtctcctctccacctcccagtaacaacgtccagtcagactctctactcaggacctgaggCCAGacagcacatgtgtcaaactcgaggcccgcgggccaaatccggtaCCTTGCAGGgtatgatccggcccgcatatcaatttaggttcacaaaacattttggcccacctagtttttgtcactttttctgattgtttttgggcgcttcttttctctgatggctgaggaactttctcCTGACTTCTTCAGGActttgtcgaccaaactgttagtgagaagactatatgacacatgtcaaatattatactttttcaataaaataaaagcctatcaataaactaaacctGTCTGGCcattgatgtgattcttattttccagtgtggccctctgggaagtagagtttgacacccctgccatccagtgaatctgtctgggtgactagaataaAGCTGATGAGTTTCTTTAGGTGACTCCTTCCTGTGTCTGTTTAGCCATGGAGGCTATCACTGATCAGGATGATGTTTGTTGACCTGACCTGAGAATGAAAACTTCTCTGCTCCTTAAATGTTGTGCATTAAATTACTTAAAtgcatgtatttgtatgtttctCTTCCACATCATGGGTATAAGAGAGAAATCACCAGATCTCCTTTATCCTCTATactttgtaatttgtaaagaaaTCCATAATCACATGTATCTGTGCATCCTGATGATCAATAAGATTAATCATTGTCCTTATCATAGCTGAGATTTAAACAAAAATCAGACTTTACTGATGGGATGTGAGCAC

Function

NR:

description
PREDICTED: tripartite motif-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150375 True 1677 lncRNA 0.43 2 2843728 2847386

Neighbor

gene id symbol gene type direction distance location
lamc2 NA coding downstream 115182 2703359 ~ 2728546 (-)
smg7 smg7 coding downstream 180963 2625838 ~ 2662765 (-)
lamc1 lamc1,LOC103398751 coding downstream 242251 2518851 ~ 2601477 (-)
LOC120568497 NA coding downstream 1079583 1756621 ~ 1764145 (-)
LOC120567872 NA coding downstream 1408453 1433235 ~ 1435275 (-)
LOC120568009 NA coding upstream 2639 2850025 ~ 2852388 (-)
LOC120568013 NA coding upstream 7537 2854923 ~ 2857623 (-)
LOC120568010 NA coding upstream 12188 2859574 ~ 2863734 (-)
LOC120568007 NA coding upstream 19869 2867255 ~ 2889739 (-)
LOC120568008 NA coding upstream 30761 2878147 ~ 2880316 (-)
G111591 NA non-coding downstream 16572 2784518 ~ 2827156 (-)
G111589 NA non-coding downstream 34637 2731110 ~ 2809091 (-)
G111620 NA non-coding downstream 42268 2801000 ~ 2801460 (-)
G111590 NA non-coding downstream 54455 2783909 ~ 2789273 (-)
G111615 NA non-coding downstream 71482 2768835 ~ 2772246 (-)
G111632 NA non-coding upstream 48611 2895997 ~ 2896199 (-)
G111638 NA non-coding upstream 84983 2932369 ~ 3025643 (-)
G111642 NA non-coding upstream 92792 2940178 ~ 2952425 (-)
G111645 NA non-coding upstream 99181 2946567 ~ 2948484 (-)
LOC120568014 NA non-coding upstream 120607 2967993 ~ 2975481 (-)
G111573 NA other downstream 265714 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 438635 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 1099889 1743300 ~ 1743839 (-)
G111226 NA other downstream 1425769 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 1434200 1391808 ~ 1409528 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 50829 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 356901 3204287 ~ 3229147 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other upstream 467260 3314646 ~ 3371775 (-)
LOC120569104 NA other upstream 598014 3445400 ~ 3456534 (-)
G111942 NA other upstream 657112 3504498 ~ 4036963 (-)

Expression


Co-expression Network