G111638


Basic Information

Item Value
gene id G111638
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2932369 ~ 3025643 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150390
CTCTGTGTTTCAAgatagtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagatctgtgtctatgcacacacacatagactcacatatatatacacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacacacacagatatacagacacacacacacacacacacacagatatacagacacacacacagacataaagacactcacacacagacacacatagacatacagacacacacacacagacacatatagacattcagacacacacacagacacatacagacacacacacagacacatacagacacacacacagacataaagacactcacacacagac
>TU150391
CTCTGTGTTTCAAgatagtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagatctgtgtctatgcacacacacatagactcacatatatatacacacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacacacacagatatacagacacacacacacacacacacacagatatacagacacacacacagacataaagacactcacacacagacacacatagacatacagacacacacacacagacacatatagacattcagacacacacacagacacatacagacacacacacagacacatacagacacacacacagacataaagacactcacacacagac
>TU150394
CTCTGTGTTTCAAgatagtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagatctgtgtctatgcacacacacatagactcacatatatatacacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacacacacacacacacagatatacagacacacacacagacataaagacactcacacacagacacacatagacatacagacacacacacacagacacatatagacattcagacacacacacagacacatacagacacacacacagacacatacagacacacacacagacataaagacactcacacacagac
>TU150395
CTCTGTGTTTCAAgatagtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagatctgtgtctatgcacacacacatagactcacatatatatacacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacacacagatatacagacacacacacacacacacacacacacacacacagatatacagacacacacacagacataaagacactcacacacagacacacatagacatacagacacacacacacagacacatatagacattcagacacacacacagacacatacagacacacacacagacacatacagacacacacacagacataaagacactcacacacagac
>TU150396
CTCTGTGTTTCAAgatagtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagatctgtgtctatgcacacacacatagactcacatatatatacacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacagatatacagacacacacacacacacacacagatatacagacacacacacacacacacacacacagatatacagacacacacacagacataaagacactcacacacagacacacatagacatacagacacacacacacagacacatatagacattcagacacacacacagacacatacagacacacacacagacacatacagacacacacacagacataaagacactcacacacagac
>TU150397
gtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttaagtaaTGTCAGTTATCaggtctgagtgtgtgtgtgtctgtgtctgtatgtctgtgtttgtgtgtgtgcgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtctgtatgtgtgtgtgtctgtatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtc
>TU150400
gtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttaagtaaTGTCAGTTATCaggtctgagtgtgtgtgtgtctgtgtctgtatgtctgtgtttgtgtgtgtgcgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagatctgtgtctatgcacacacacatagactcacatatatatacacacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacagatatacagacacacacacacacacacacagatatacagacacacacacacacacacacacacacacacagatatacagacacacacacagacataaagacactcacacacagacacacatagacatacagacacacacacacagacacatatagacattcagacacacacacagacacatacagacacacacacagacacatacagacacacacacagacataaagacactcacacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150390 False 516 lncRNA 0.44 4 2932369 3010514
TU150391 False 518 lncRNA 0.44 4 2932369 3010514
TU150394 False 468 lncRNA 0.45 3 2932369 3010514
TU150395 False 500 lncRNA 0.45 3 2932369 3010514
TU150396 False 516 lncRNA 0.44 4 2932369 3010514
TU150397 False 445 lncRNA 0.48 2 3025024 3025643
TU150400 True 669 lncRNA 0.45 5 2932369 3025643

Neighbor

gene id symbol gene type direction distance location
LOC120568007 NA coding downstream 42630 2867255 ~ 2889739 (-)
LOC120568008 NA coding downstream 52053 2878147 ~ 2880316 (-)
LOC120568010 NA coding downstream 68635 2859574 ~ 2863734 (-)
LOC120568013 NA coding downstream 74746 2854923 ~ 2857623 (-)
LOC120568009 NA coding downstream 79981 2850025 ~ 2852388 (-)
LOC120568011 NA coding upstream 132559 3158202 ~ 3181305 (-)
LOC120568004 NA coding upstream 157939 3183582 ~ 3200853 (-)
LOC120568006 NA coding upstream 208725 3234368 ~ 3254369 (-)
LOC120568323 NA coding upstream 645907 3671550 ~ 3706170 (-)
LOC120568526 NA coding upstream 721654 3747297 ~ 3751140 (-)
G111632 NA non-coding downstream 36170 2895997 ~ 2896199 (-)
G111578 NA non-coding downstream 44488 2779482 ~ 2887881 (-)
G111626 LOC104959728 non-coding downstream 84983 2843728 ~ 2847386 (-)
G111591 NA non-coding downstream 105213 2784518 ~ 2827156 (-)
G111620 NA non-coding downstream 130909 2801000 ~ 2801460 (-)
G111660 NA non-coding upstream 400 3026043 ~ 3071500 (-)
G111663 NA non-coding upstream 22328 3047971 ~ 3050174 (-)
G111659 NA non-coding upstream 39886 3065529 ~ 3066845 (-)
G111667 NA non-coding upstream 42199 3067842 ~ 3068680 (-)
G111662 NA non-coding upstream 44969 3070612 ~ 3145877 (-)
G111573 NA other downstream 354355 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 527276 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 1188530 1743300 ~ 1743839 (-)
G111226 NA other downstream 1514410 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 1522841 1391808 ~ 1409528 (-)
LOC120568005 NA other upstream 178644 3204287 ~ 3229147 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other upstream 289003 3314646 ~ 3371775 (-)
LOC120569104 NA other upstream 419757 3445400 ~ 3456534 (-)
G111942 NA other upstream 478855 3504498 ~ 4036963 (-)
LOC120568522 NA other upstream 538903 3564546 ~ 3585526 (-)

Expression


Co-expression Network