G111642


Basic Information

Item Value
gene id G111642
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2940178 ~ 2952425 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150405
CAAGATAgtaatactcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcactcccagaatgcacctgaacacacctccctgtaagaccagcacgcccatgggccacagatgagCACAGGTGCATTATTTAAATGAAGTGTGCGCTGGACGGGACATTGacaactagcaaagacacttgcgtcgggctttgcgctgcgcttcACCGGGTGCAAGATAAGGACCAAAGACCCatctcgagtactacaacactggatTTAAGCTTCATCTTTCTAACAAATCGTTGCAGTTTTATAAGAGAAAAGACTTCTCGGAGGAAGACTGACTGTCTGGTCAACTTTCCCACCAACGAAGAGAACTTGGAGCCGTTTCCCTGAGCTTCTCCAAACCACCCGAGACACGGCTGTTTCAGTTTACCAACAACAAACAACGATCCTTTTCCACCAAAAAAACCCCAGAAACGACAGGAAATGTACTTTCAAGCAACAGAGGAACTTCTTCTTCGGGCTGTGCCTGATTTTTGGGGAAGTGAGTGTCTGTCTAAGATCCACAGAGACATTTAGCCAAAGGGTGaaatacaaaaagaaatggTTTCAAAAGCTCGCACATTCAATAAGTTTGTAATTTGTAGCCAGTAAATCACCTAGTTTGAAGGATGAAGATGATTCTCCGGGCAGCAAACACGCACAGATGTGTTTctgatttaacccttgtgttgtccctctggttaaatttgacccattttcatagttttttaaATCCGAAAtatgggtttatttcaaccaaattgccccaaaataacttggatgcatgcatgtacgttAAATGGAAGCCATAACACATTCTTCGcatgtaaaattaatgattactttcattgaatgttggctgttttattaaatttcacATAAACTGTGATCTATTCAACATACTCtcatcttaactattagtcccAATCATTGATAATTTGAGTATTGAGCATGCCCCCCCCAGGTTAGGGATGAGCCCCCTCCCTCGAATGTTTATGCTgcattccagacacaattttcagcccgtaagttacgacttcaagtcacgactgaGGACTTGGTAACGACAAAAACCTTGTAACTAGCGTTAGCTATCGGATACCTAACagtgacgttagctagcgttagctcatactagcgatttctagtccgcaacatattttgggcttcatttaataaaggtaacctgtagtagtacacaatcatACGTGTTTGTTTTGACCAATCAGCGATGTTCAGTcctgtaaaaacaacaaaaaccagCAGTTTTCAGTCAACTGAGAAGTTGGACCTCGGCCACAGAGACTTTGGTTTCTGAGGTAGGAACTGCGGCGCGAGGATTTATAGCCGAACAACAACGTTCCTCCGGTGTGACAAGTTCCTGGGTTATTGATGAAATAGTTCTGGGAAACCTTCTTGTGGTGGAAAAGGATCTGAAGTGAAAACCAAGACATGCAGCTAACAGATCAGAGCTGCTTTTAAACCGTCAAAGCTGCATTCACGTCACATGACCGGTACAGACCAATGGTAAACGTTAGGGCTGAGGGACATGTGCTTTTGTCAACATAAGTTgattaatacacttctagagacaatatatcacgGCCGCGTCgagccaggcaggtaatcatATACAGGAAGGCCACACTGCAGCCGGacactttacaaaataaagcaaatttcaaaataaaacagccaGGTTTTgtggtgattttggctgtctaGACTTCTCAGCTGTGTGTACAGCGAGACACACGATTAGACACACGGAAAGAgagaccgacacacacagacacacacacacagacacacacatgcatatacactctcacacacacacacacacacacacacacacacacagacacacacacacacacacacacaa
>TU150408
CAAGATAgtaatactcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcactcccagaatgcacctgaacacacctccctgtaagaccagcacgcccatgggccacagatgagCACAGGTGCATTATTTAAATGAAGTGTGCGCTGGACGGGACATTGacaactagcaaagacacttgcgtcgggctttgcgctgcgcttcACCGGGTGCAAGATAAGGACCAcaacactggatTTAAGCTTCATCTTTCTAACAAATCGTTGCAGTTTTATAAGAGAAAAGACTTCTCGGAGGAAGACTGACTGTCTGGTCAACTTTCCCACCAACGAAGAGAACTTGGAGCCGTTTCCCTGAGCTTCTCCAAACCACCCGAGACACGGCTGTTTCAGTTTACCAACAACAAACAACGATCCTTTTCCACCAAAAAAACCCCAGAAACGACAGGAAATGTACTTTCAAGCAACAGAGGAACTTCTTCTTCGGGCTGTGCCTGATTTTTGGGGAAGTGAGTGTCTGTCTAAGATCCACAGAGACATTTAGCCAAAGGGTGaaatacaaaaagaaatggTTTCAAAAGCTCGCACATTCAATAAGTTTGTAATTTGTAGCCAGTAAATCACCTAGTTTGAAGGATGAAGATGATTCTCCGGGCAGCAAACACGCACAGATGTGTTTctgatttaacccttgtgttgtccctctggttaaatttgacccattttcatagttttttaaATCCGAAAtatgggtttatttcaaccaaattgccccaaaataacttggatgcatgcatgtacgttAAATGGAAGCCATAACACATTCTTCGcatgtaaaattaatgattactttcattgaatgttggctgttttattaaatttcacATAAACTGTGATCTATTCAACATACTCtcatcttaactattagtcccAATCATTGATAATTTGAGTATTGAGCATGCCCCCCCCAGGTTAGGGATGAGCCCCCTCCCTCGAATGTTTATGCTgcattccagacacaattttcagcccgtaagttacgacttcaagtcacgactgaGGACTTGGTAACGACAAAAACCTTGTAACTAGCGTTAGCTATCGGATACCTAACagtgacgttagctagcgttagctcatactagcgatttctagtccgcaacatattttgggcttcatttaataaaggtaacctgtagtagtacacaatcatACGTGTTTGTTTTGACCAATCAGCGATGTTCAGTcctgtaaaaacaacaaaaaccagCAGTTTTCAGTCAACTGAGAAGTTGGACCTCGGCCACAGAGACTTTGGTTTCTGAGGTAGGAACTGCGGCGCGAGGATTTATAGCCGAACAACAACGTTCCTCCGGTGTGACAAGTTCCTGGGTTATTGATGAAATAGTTCTGGGAAACCTTCTTGTGGTGGAAAAGGATCTGAAGTGAAAACCAAGACATGCAGCTAACAGATCAGAGCTGCTTTTAAACCGTCAAAGCTGCATTCACGTCACATGACCGGTACAGACCAATGGTAAACGTTAGGGCTGAGGGACATGTGCTTTTGTCAACATAAGTTgattaatacacttctagagacaatatatcacgGCCGCGTCgagccaggcaggtaatcatATACAGGAAGGCCACACTGCAGCCGGacactttacaaaataaagcaaatttcaaaataaaacagccaGGTTTTgtggtgattttggctgtctaGACTTCTCAGCTGTGTGTACAGCGAGACACACGATTAGACACACGGAAAGAgagaccgacacacacagacacacacacacagacacacacatgcatatacactctcacacacacacacacacacacacacacacacacagacacacacacacacacacacacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150405 True 2000 lncRNA 0.44 2 2940178 2952425
TU150408 False 1980 lncRNA 0.44 3 2940178 2952425

Neighbor

gene id symbol gene type direction distance location
LOC120568007 NA coding downstream 50439 2867255 ~ 2889739 (-)
LOC120568008 NA coding downstream 59862 2878147 ~ 2880316 (-)
LOC120568010 NA coding downstream 76444 2859574 ~ 2863734 (-)
LOC120568013 NA coding downstream 82555 2854923 ~ 2857623 (-)
LOC120568009 NA coding downstream 87790 2850025 ~ 2852388 (-)
LOC120568011 NA coding upstream 205777 3158202 ~ 3181305 (-)
LOC120568004 NA coding upstream 231157 3183582 ~ 3200853 (-)
LOC120568006 NA coding upstream 281943 3234368 ~ 3254369 (-)
LOC120568323 NA coding upstream 719125 3671550 ~ 3706170 (-)
LOC120568526 NA coding upstream 794872 3747297 ~ 3751140 (-)
G111632 NA non-coding downstream 43979 2895997 ~ 2896199 (-)
G111626 LOC104959728 non-coding downstream 92792 2843728 ~ 2847386 (-)
G111591 NA non-coding downstream 113022 2784518 ~ 2827156 (-)
G111620 NA non-coding downstream 138718 2801000 ~ 2801460 (-)
G111590 NA non-coding downstream 150905 2783909 ~ 2789273 (-)
LOC120568014 NA non-coding upstream 15568 2967993 ~ 2975481 (-)
G111650 NA non-coding upstream 31997 2984422 ~ 2985134 (-)
G111655 NA non-coding upstream 45649 2998074 ~ 2998527 (-)
G111660 NA non-coding upstream 73618 3026043 ~ 3071500 (-)
G111663 NA non-coding upstream 95546 3047971 ~ 3050174 (-)
G111573 NA other downstream 362164 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 535085 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 1196339 1743300 ~ 1743839 (-)
G111226 NA other downstream 1522219 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 1530650 1391808 ~ 1409528 (-)
LOC120568005 NA other upstream 251862 3204287 ~ 3229147 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other upstream 362221 3314646 ~ 3371775 (-)
LOC120569104 NA other upstream 492975 3445400 ~ 3456534 (-)
G111942 NA other upstream 552073 3504498 ~ 4036963 (-)
LOC120568522 NA other upstream 612121 3564546 ~ 3585526 (-)

Expression


Co-expression Network