LOC120568520 (LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200)


Basic Information

Item Value
gene id LOC120568520
gene name LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3314646 ~ 3371775 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150514
ACATGTCGCTAATGCTACAGTGTagcatgtcacactgtagcattagtGAGTAACGAGATGGTCCTGtgtctccctccccccccagactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacagcagaTGTTGTAACGAGCTGGTCCCGTGTCTCCCCCCAGACCTCCAGATggttaacgtgtgtgtgtgtaacagcagATGTTGTAACCAGATGTTCCCGTGTCCCCCAGACCTCCAGATGGTGAACATCTCTCTGCGTGTCCTGTCGCGGCCGCTGGCCTCCAACCTGCCGATCCTCTACCAGCAGCTGGGACAGGACTACGACGAGCGCGTCCTGCCCTCCATCGTCAACGAGGTGCTGAAGAGCGTCGTGGCCAAGTTCAACGCCTCGCAGCTCATCACCCAGAGAGCACAGGTTTCGCTGCTGATCCGCAGAGAGCTGTTTGAGCGAGCGAAGGACTTCAACATCATCCTGGATGACGTGGCCATCACCGAGCTCAGCTTCAGCCGCGAGTACACCGCCGCCGTCGAGGCAAAGCAAGTCGcccAGCAGGAGGCTCAGCGAGCTTTCTTCTACGTTGAAAAAGCCAAACAggaccagagacacaaaatcatCCAGGCTGAAGGAGAAGCCACGGCCGCCAAGATGCTGGGCGAGGCAGTGACGAAGAACCCAGGCTACCTGAAGCTGAGGAAGATCCGAGCGGCCCAGACCATCGCCAAGACGatgtccCAGTC
>XM_039816093.1
ATGGACCGGGGCCCCAGTGGACCGAGGGACAGGGATCAGGGCCCGGCCCAGGACCTCCAGATGGTGAACATCTCTCTGCGTGTCCTGTCGCGGCCGCTGGCCTCCAACCTGCCGATCCTCTACCAGCAGCTGGGACAGGACTACGACGAGCGCGTCCTGCCCTCCATCGTCAACGAGGTGCTGAAGAGCGTCGTGGCCAAGTTCAACGCCTCGCAGCTCATCACCCAGAGAGCACAGGTTTCGCTGCTGATCCGCAGAGAGCTGTTTGAGCGAGCGAAGGACTTCAACATCATCCTGGATGACGTGGCCATCACCGAGCTCAGCTTCAGCCGCGAGTACACCGCCGCCGTCGAGGCAAAGCAAGTCGcccAGCAGGAGGCTCAGCGAGCTTTCTTCTACGTTGAAAAAGCCAAACAggaccagagacacaaaatcatCCAGGCTGAAGGAGAAGCCACGGCCGCCAAGATGCTGGGCGAGGCAGTGACGAAGAACCCAGGCTACCTGAAGCTGAGGAAGATCCGAGCGGCCCAGACCATCGCCAAGACGGTaagaatttgtttttgtttttatttctttatttaaaagggaccGTGCACG

Function

NR:

description
prohibitin-2 isoform X2

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150514 True 804 TUCP 0.57 5 3314646 3369939
XM_039816093.1 False 600 mRNA 0.59 5 3349075 3371775
Loading

Neighbor

gene id symbol gene type direction distance location
LOC120568006 NA coding downstream 60277 3234368 ~ 3254369 (-)
LOC120568004 NA coding downstream 113793 3183582 ~ 3200853 (-)
LOC120568011 NA coding downstream 133341 3158202 ~ 3181305 (-)
LOC120568007 NA coding downstream 424907 2867255 ~ 2889739 (-)
LOC120568008 NA coding downstream 434330 2878147 ~ 2880316 (-)
LOC120568323 NA coding upstream 299775 3671550 ~ 3706170 (-)
LOC120568526 NA coding upstream 375522 3747297 ~ 3751140 (-)
LOC120568321 NA coding upstream 377682 3749457 ~ 3760667 (-)
LOC120568324 NA coding upstream 489554 3861329 ~ 3871815 (-)
LOC120568530 NA coding upstream 511981 3883756 ~ 3889916 (-)
G111706 NA non-coding downstream 676 3313689 ~ 3313970 (-)
G111705 NA non-coding downstream 7713 3305835 ~ 3306933 (-)
G111704 NA non-coding downstream 9119 3304415 ~ 3305527 (-)
G111683 NA non-coding downstream 10308 3254475 ~ 3304338 (-)
G111700 NA non-coding downstream 22800 3251454 ~ 3291846 (-)
G111712 NA non-coding upstream 3496 3375271 ~ 3375715 (-)
G111713 NA non-coding upstream 5039 3376814 ~ 3377056 (-)
G111714 LOC102211951,LOC102296991,LOC102799200,LOC101465856 non-coding upstream 16355 3388130 ~ 3397965 (-)
G111716 NA non-coding upstream 26463 3398238 ~ 3399183 (-)
G111740 NA non-coding upstream 66137 3437912 ~ 3439115 (-)
LOC120568005 NA other downstream 85499 3204287 ~ 3229147 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other downstream 172192 2898215 ~ 3142454 (-)
G111573 NA other downstream 736632 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 909553 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 1570807 1743300 ~ 1743839 (-)
LOC120569104 NA other upstream 73625 3445400 ~ 3456534 (-)
G111942 NA other upstream 132723 3504498 ~ 4036963 (-)
LOC120568522 NA other upstream 192771 3564546 ~ 3585526 (-)
LOC120568325 NA other upstream 257790 3629565 ~ 3633399 (-)
G112043 NA other upstream 866327 4238102 ~ 4238670 (-)

Expression

LOC120568520(LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200) Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
End of interactive chart.

LOC120568520(LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200) Expression in each Bioproject

Bar chart with 8 bars.
LOC120568520(LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
End of interactive chart.

Co-expression Network