G111727


Basic Information

Item Value
gene id G111727
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3439188 ~ 3439413 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150539
TGACCTCTGCGGAGCGCCATGCAGATCTCACCTCCAGCAAACTGAACGGTTTAAACGATGTGATTAAACCGTCTGGGACGAGGAAACAGCCTCTGAGGTACAACACTAGGTAATGATTTAACCTTCATTCATGCAGAACGGTTCACTGAACTCATGTGTTTGTCCTTCGTACAGTATACAgtaagggctcctgcacactggctgtgtggcatgagcgtgtcagctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150539 True 226 lncRNA 0.49 1 3439188 3439413

Neighbor

gene id symbol gene type direction distance location
ptmab NA coding upstream 134962 3298864 ~ 3304226 (+)
LOC120568826 LOC106675582 coding upstream 705290 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 749972 2665824 ~ 2689216 (+)
LOC120568517 NA coding upstream 974348 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 1217297 2221448 ~ 2221891 (+)
LOC120568524 NA coding downstream 157002 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 276153 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 364485 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 376407 3815820 ~ 3825434 (+)
vcpip1 vcpip1,LOC102795816 coding downstream 497218 3936631 ~ 3949566 (+)
G111723 NA non-coding upstream 19297 3419424 ~ 3419891 (+)
G111720 NA non-coding upstream 32515 3406445 ~ 3406673 (+)
G111719 NA non-coding upstream 33863 3405066 ~ 3405325 (+)
G111553 NA non-coding upstream 53826 3383917 ~ 3385362 (+)
G111550 NA non-coding upstream 66995 3371897 ~ 3372193 (+)
G111728 NA non-coding downstream 753 3440166 ~ 3441079 (+)
G111717 NA non-coding downstream 5987 3445400 ~ 3450042 (+)
G111732 NA non-coding downstream 12758 3452171 ~ 3452899 (+)
G111733 NA non-coding downstream 13558 3452971 ~ 3453769 (+)
G111735 NA non-coding downstream 16236 3455649 ~ 3456553 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other upstream 40005 3388054 ~ 3399183 (+)
G111494 NA other upstream 363287 3016958 ~ 3075901 (+)
G111484 NA other upstream 373159 2931639 ~ 3066029 (+)
G111486 LOC107102160,LOC102799505,LOC103352980 other upstream 498340 2938149 ~ 2940848 (+)
G111452 NA other upstream 614600 2816944 ~ 2824588 (+)
LOC120568331 NA other downstream 52176 3491589 ~ 3506128 (+)
LOC120568327 LOC102295145 other downstream 61266 3500679 ~ 3525115 (+)
LOC120568521 NA other downstream 101574 3540987 ~ 3852034 (+)
G111848 NA other downstream 649231 4088644 ~ 4137543 (+)
G111850 LOC102799398 other downstream 651095 4090508 ~ 4138933 (+)

Expression


Co-expression Network