LOC120568331


Basic Information

Item Value
gene id LOC120568331
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3491589 ~ 3506128 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150561
CGATCATTCAGCCACCTACTACTGCTCCTGTTGGAAGGATGCTCCccacagtgagaaatgctcCCTGCAGCCTGAACAAAAACCTCCAGATGAACAGATGTCAAACAGTGTTTGTGACAGGAAGAGATCAGTAAACCACAGCCCAGGTTCACATATTTCACCTCCATCTCAGCCAGAGTCACTAACAGTGTTGGGCAGTAACGC
>XM_039815755.1
TTATCTGTCTGCTGCAGGGGCTGATGGGAGATGTGAGGAGCTGTTAGAAACCACGTGGCCCTCGTCTGATCTCACAGCTCGTCCTTGTTTGGCCTCAGCTGCATCAGAGCGCCACTTCTCCCCAGGTTCACCAGAGGAAACACCACTGAACTAAATGCTTttcctcccagctgctgctctgtgctgtctgtgttcAGCGCTGGCTGCCATGGCAACACAGCTGATTCAGGATGATTTAACATTGACCAGGAGAGTTGGTGGAGACGTCTCCTTCAGCTGTCGAGGCACTCAGCAGTGTGACAATACTTATGATTATGTATACTGGTACcagaagagagacacagaaacattcaCAAGGATTCTTCGTATTGATCCGAGTGATGGTGGCATACATAAGGGATACAATCATTCTCAGGAAGATGATTTCTCAGCTGTGAATAAAAGAAATGGCTGGGAGTTGCAGATCCAAAGCATTAAACCCGATCATTCAGCCACCTACTACTGCTCCTGTTGGAAGGATGCTCCccacaTCGGATACTACTACATCTTTGGCTCTGGAACTAAACTGATTGTAACAGATGAGCCGGTAGTGAAGCCCGTGGTGAGCGTGTACCCAGCAGCATCCAGAGCCCACCTGGAGGGGAAGAGCTCCCTGCTGTGTCTGGCCTCAGCTATGTTTCCTCCTCTGGTCCAGTTCTCCTGGAAAAGACGTAATGAGACTGGTCCTCTGGAGGAGCTGCCCTCTGATGATATAGAGCAGCTGGAGATCAGAGAGTCAGGACACACCGCCTCCATCTTGCTGATCCATCAGAAAGAGAACAGCACATATAAATACCGCTGTGACGTCCTACATGAGGGGGGGACAGTGGAGGCCCAAACAGAACAAGaGGTTCCAGCTCCAGCAGCCTCCTGTCCTCCAGAGAGAGATCCACCAGACCAGCTAGCTCTGGAGGAAGCTGACTtgtcctTCCAGTCCCAGTGCAGGGTGAAGTTGTTCTGTCTGCTGTACACCCAGCTGATAGTGAAGAGTCTGGTGTACTGCTGTGGACTCTCTCTGCTGATGATCCTCAGAAACAAGGGACCGTCCACCAGCTGCTCACATGCTGACTGACTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150561 False 204 lncRNA 0.49 1 3492163 3492366
XM_039815755.1 True 1117 mRNA 0.51 6 3491589 3506128

Neighbor

gene id symbol gene type direction distance location
ptmab NA coding upstream 187363 3298864 ~ 3304226 (+)
LOC120568826 LOC106675582 coding upstream 757691 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 802373 2665824 ~ 2689216 (+)
LOC120568517 NA coding upstream 1026749 2463673 ~ 2464840 (+)
LOC120567899 NA coding upstream 1269698 2221448 ~ 2221891 (+)
LOC120568524 NA coding downstream 90287 3596415 ~ 3600572 (+)
LOC120568326 NA coding downstream 209438 3715566 ~ 3715955 (+)
LOC120568529 NA coding downstream 297770 3803898 ~ 3807690 (+)
LOC120568332 NA coding downstream 309692 3815820 ~ 3825434 (+)
vcpip1 vcpip1,LOC102795816 coding downstream 430503 3936631 ~ 3949566 (+)
G111744 NA non-coding upstream 4382 3486855 ~ 3487207 (+)
G111735 NA non-coding upstream 35036 3455649 ~ 3456553 (+)
G111733 NA non-coding upstream 37820 3452971 ~ 3453769 (+)
G111732 NA non-coding upstream 38690 3452171 ~ 3452899 (+)
G111717 NA non-coding upstream 41547 3445400 ~ 3450042 (+)
G111752 NA non-coding downstream 135 3506263 ~ 3552735 (+)
G111765 NA non-coding downstream 13014 3519142 ~ 3594107 (+)
G111761 NA non-coding downstream 16729 3522857 ~ 3549797 (+)
G111768 NA non-coding downstream 61844 3567972 ~ 3633295 (+)
LOC120568340 NA non-coding downstream 62605 3568733 ~ 3575838 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other upstream 92406 3388054 ~ 3399183 (+)
G111494 NA other upstream 415688 3016958 ~ 3075901 (+)
G111484 NA other upstream 425560 2931639 ~ 3066029 (+)
G111486 LOC107102160,LOC102799505,LOC103352980 other upstream 550741 2938149 ~ 2940848 (+)
rasal2 NA other upstream 664735 2787779 ~ 2826854 (+)
LOC120568521 NA other downstream 34859 3540987 ~ 3852034 (+)
G111848 NA other downstream 582516 4088644 ~ 4137543 (+)
G111850 LOC102799398 other downstream 584380 4090508 ~ 4138933 (+)
tmeff1a tmeff1,LOC102775778 other downstream 705996 4212124 ~ 4326186 (+)
dnaaf11 NA other downstream 992866 4498994 ~ 4592347 (+)

Expression


Co-expression Network