G111789


Basic Information

Item Value
gene id G111789
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3791992 ~ 3841959 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150643
TAAGGTTTTCAaggtttattaaattaaaatcgcTATCAGCATGAATCACTTAGTCCAAACTACTCATCTAACACCAAACAGATAAACCAACCAAGTATGCACATTAAACTGTAGAGCAATCAATAAGTAACAAgcagaaagaaaatatcaattaaaaaaatattttttttgtactgtaaAAGTGGTGAAACTGAATGGTGTCATGTTGTGTGGGGACAGTGTGTGGTCACAATCTGTGCCCTGTAGAATTTTGCGGCCTCCAATTTAGCTAAGAGCTGTTGCTGCAGGCCTCGCTTTAGCGTCTCAATTTCCTCAGCTTTTTCTTTCAAGAGTATCTGCATTCTAATCATTTCCAGCTCCTCTTTCGCTTTCTGTATGGCCTGTTTGGCTTGAGCAAGTCTCTTTTCCTCAATCACCAGGACTTTAAGTTCTTTCTCCAGAGCTTTCTGATTCTTTATTACCTGGAGTAGCCTGGCAGTGAGTACTTTTTTTTCCTGAACAAGAGCCTTCTTTTTGCTTAAAGTGTCAACCAGTAGAGCCTTTTCCAGTCTGAAGTCTGCAGCTTGTGTCTCGCTGTAGTGGTTCAGCTCTGCATTTACTGAGACAAGCTGCAGCTGGAAGGGGTCTTTATTTTCATGCGGTTGTTGAGTAAACAGATCTTCCTTGGATTGCAAATCCTCCTCAGCCTTCCTTTGGATCGCTTGTTGCATATTTGACTGCTCTGAGATCTCAGACTCTAGCAGCATTCTCTGTTCCTCcatcttcctctctttttcatAAGATGCTGACAGTTGCTGGTGCAGAAGCTCG

Function

NR:

description
PREDICTED: complement C4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150643 True 810 lncRNA 0.41 2 3791992 3841959

Neighbor

gene id symbol gene type direction distance location
LOC120568326 NA coding upstream 76037 3715566 ~ 3715955 (+)
LOC120568524 NA coding upstream 191420 3596415 ~ 3600572 (+)
ptmab NA coding upstream 487766 3298864 ~ 3304226 (+)
LOC120568826 LOC106675582 coding upstream 1058094 2732606 ~ 2733898 (+)
nmnat2 nmnat2 coding upstream 1102776 2665824 ~ 2689216 (+)
vcpip1 vcpip1,LOC102795816 coding downstream 94672 3936631 ~ 3949566 (+)
dusp28 dusp28,LOC102795231 coding downstream 117633 3959592 ~ 3964053 (+)
LOC120568531 NA coding downstream 144486 3986445 ~ 3992589 (+)
LOC120568532 NA coding downstream 153658 3995617 ~ 3997859 (+)
crfb16 NA coding downstream 209361 4051320 ~ 4065021 (+)
G111779 NA non-coding upstream 133121 3655819 ~ 3658871 (+)
G111768 NA non-coding upstream 158697 3567972 ~ 3633295 (+)
G111765 NA non-coding upstream 197885 3519142 ~ 3594107 (+)
G111819 NA non-coding downstream 108985 3950944 ~ 3957274 (+)
G111821 NA non-coding downstream 112069 3954028 ~ 4018396 (+)
G111832 LOC102198835,LOC101471160,LOC102289605,LOC100700585,LOC102794384,LOC101068328 non-coding downstream 160055 4002014 ~ 4010693 (+)
G111844 NA non-coding downstream 243143 4085102 ~ 4087986 (+)
G111851 LOC104960641,LOC102303545,LOC106675581,LOC102799398,LOC102203668 non-coding downstream 249068 4091027 ~ 4139026 (+)
LOC120568327 LOC102295145 other upstream 266877 3500679 ~ 3525115 (+)
LOC120568331 NA other upstream 285864 3491589 ~ 3506128 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other upstream 392809 3388054 ~ 3399183 (+)
G111494 NA other upstream 716091 3016958 ~ 3075901 (+)
G111486 LOC107102160,LOC102799505,LOC103352980 other upstream 851144 2938149 ~ 2940848 (+)
G111848 NA other downstream 246685 4088644 ~ 4137543 (+)
G111850 LOC102799398 other downstream 248549 4090508 ~ 4138933 (+)
tmeff1a tmeff1,LOC102775778 other downstream 370165 4212124 ~ 4326186 (+)
dnaaf11 NA other downstream 657035 4498994 ~ 4592347 (+)
G111910 NA other downstream 703466 4545425 ~ 4546082 (+)

Expression


Co-expression Network