G111821


Basic Information

Item Value
gene id G111821
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3954028 ~ 4018396 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150676
TGAAataagaaggagaagaagaagaagaaagatgaTTTTAAACTGTTCCACAGTGTGATGAATACTAAACATAAACACGCTGCTGGATTAATAACTTCTTCATGTTCGATCACAGCGCAGCGGTGCTTTTAGACGCCAACCGTGTTCATCCACACGCTCAAAGTTAAGGTTAACCCTTGCGTGGTCCTCGGCTCAAAttggacccattttcaaaaaaagtttcaatatgttaaataaatgataactTCGCTACTTTCATTAAATgtgtgaaaaagtgacaaaaaaaagcttCGAAAACGTTTGGGAAACGAGAcagaaacattgaaaaagaagtgacaaaatCATCGGGGAAAAGAGGCAACGAAATCgaccaaaaatgttgaaaaaaggttttaattttAACCCAGAAAAACGAAAAAAGTTGCACGGTTGACAGggagacaacacgagggttaaacaTGTCCGCCGTTCAAAAAGAAGTGAACACAAGAATGCGATGTGACCGGACCTTCGCTGTCGTTGGCCCATGTTTgaaagtcacttttttttcaacgttcttttatcaattgttttttcttcacatgctattaaattgactaaaacgcccaaattcaatgaaagtactgagctgattatttatttaacttgttaagagcgttgtagggaaccatccacatacatttttttggacaatttggttgaaagaaacccaaatatTCTGATTataaaaactttttgaaaatgggtcagatttgaccggAGGCCAACAGGAGGGATAAAGCTCCCTTTATGACGGAAAATAACAACATTGGCTCTTTGATTTTGAAAGATATGGCTCAAAATCTTTTAATTTCTTCTGCTGTTGGGAGTTCTTGGGGAggcagaaaacacaaaagttgTTCAACTTGACAACAAGGTTGTtcactgatttttttatttcggGTGAAAACGGCAGCTTTATTTACGGCGATTCATTAATTTAACCAAAAGTACGAGGACGCGGGAGGCCGAACAGTTTGGCGCTGCTTCAGCGTTTTATACGAAACCCACAACACGTTGAATTAATACCTCCCTAAAGTCGTGATTAGATGATTATGAAGAGCTGTTTTCCCAGCATCCTTTGGGGCTTTGCTCACTACAACAATGGCCCCGATTTAAAAGTTTAATTTGAACCAAAGAAGGCTCAGAGTTCAGCGCCGGACGCCTGAACAGTAAGACTAGTTTAAAGGAAGAGTTTGATGTTCAGATTTGTTcccaggttagcttagcttagcttagcataaaggtggaaaccgctagcctggctctgtcagaCAGCTACAAAATCCACCCAGCGGCACTTCTTCCACTCCCTGATTAAAATGTGATTAATGCTCCTGTGTTAAATCAAGGCcggctttgtttctctcactatgactcaaGGGTCAatactcactctgaagataatcaccatcactctctctaacacacacacacaagacagacacacacacacacacacacacacacacacacacacacacacacacacacagacagacagacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150676 True 1549 lncRNA 0.40 2 3954028 4018396

Neighbor

gene id symbol gene type direction distance location
vcpip1 vcpip1,LOC102795816 coding upstream 4462 3936631 ~ 3949566 (+)
LOC120568332 NA coding upstream 128594 3815820 ~ 3825434 (+)
LOC120568529 NA coding upstream 146338 3803898 ~ 3807690 (+)
LOC120568326 NA coding upstream 238073 3715566 ~ 3715955 (+)
LOC120568524 NA coding upstream 353456 3596415 ~ 3600572 (+)
crfb16 NA coding downstream 32924 4051320 ~ 4065021 (+)
cavin4a murc,LOC104936762,LOC101469804,LOC100705704,LOC101164252 coding downstream 318689 4337085 ~ 4349158 (+)
ift57 ift57,LOC102793808 coding downstream 358769 4377165 ~ 4393309 (+)
LOC120568271 NA coding downstream 398225 4416621 ~ 4418585 (+)
tmem71 NA coding downstream 440488 4458884 ~ 4474374 (+)
G111789 NA non-coding upstream 112069 3791992 ~ 3841959 (+)
G111785 NA non-coding upstream 124169 3743977 ~ 3829859 (+)
G111792 NA non-coding upstream 153330 3799802 ~ 3800698 (+)
LOC120568336 LOC106921407,LOC102295145 non-coding upstream 155688 3795799 ~ 3798340 (+)
G111779 NA non-coding upstream 295157 3655819 ~ 3658871 (+)
G111844 NA non-coding downstream 66706 4085102 ~ 4087986 (+)
G111851 LOC104960641,LOC102303545,LOC106675581,LOC102799398,LOC102203668 non-coding downstream 72631 4091027 ~ 4139026 (+)
G111847 NA non-coding downstream 73018 4091414 ~ 4139495 (+)
G111852 NA non-coding downstream 74443 4092839 ~ 4140904 (+)
G111853 NA non-coding downstream 74955 4093351 ~ 4141678 (+)
LOC120568521 NA other upstream 101994 3540987 ~ 3852034 (+)
LOC120568327 LOC102295145 other upstream 428913 3500679 ~ 3525115 (+)
LOC120568331 NA other upstream 447900 3491589 ~ 3506128 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other upstream 554845 3388054 ~ 3399183 (+)
G111494 NA other upstream 878127 3016958 ~ 3075901 (+)
G111848 NA other downstream 70248 4088644 ~ 4137543 (+)
G111850 LOC102799398 other downstream 72112 4090508 ~ 4138933 (+)
tmeff1a tmeff1,LOC102775778 other downstream 193728 4212124 ~ 4326186 (+)
dnaaf11 NA other downstream 480598 4498994 ~ 4592347 (+)
G111910 NA other downstream 527029 4545425 ~ 4546082 (+)

Expression


Co-expression Network