G111832 (LOC102198835,LOC101471160,LOC102289605,LOC100700585,LOC102794384,LOC101068328)


Basic Information

Item Value
gene id G111832
gene name LOC102198835,LOC101471160,LOC102289605,LOC100700585,LOC102794384,LOC101068328
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4002014 ~ 4010693 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150690
AGGCACGTTCCTTTAATTAAGTCTAAAGCTACTTTTAGCACAAACTCGAGGTGACTTAAACTTCCAGCGGTCTTATTTACAGCCGTCGTCACTCTGGCCGACTCTCCGTCTTTCTCCTTTATTTCTCTTTGGGCTCCATGTCGTCACCGCCCGACACGTTTCCATCTTCGTCCTCGTCATCGACCATCCCCTTCAGGTAGGAGCGTTTGAACTCCTGGAACTCAAgctcgtcctcctcctcaTTCTCCTTCACTGCATCAGGTTTAGGATGCATCAGTTTGAAGGGAACTTCCAGGCCAACCTCACTTGATCCCATTATCC
>TU150691
AGGCACGTTCCTTTAATTAAGTCTAAAGCTACTTTTAGCACAAACTCGAGGTGACTTAAACTTCCAGCGGTCTTATTTACAGCCGTCGTCACTCTGGCCGACTCTCCGTCTTTCTCCTTTATTTCTCTTTGGGCTCCATGTCGTCACCGCCCGACACGTTTCCATCTTCGTCCTCGTCATCGACCATCCCCTTCAGGTAGGAGCGTTTGAACTCCTGGAACTCAAgctcgtcctcctcctcaAGACAGTGTAGCTCGCTTCATTGCTAAAGAGATGCTGTCCTTTAGTATCGTCGAAAAGCCGTCATTTCGGCGAAtgtgcactctctctctctcgtccttGGTGCACACCCTGCTGTGGACATAGACTGAAATTCACTTTCGCTTTATTTGAACAAAGCTTTATGCTGgagaaattatttttaaaaagcattttgcATATGGCCTGTTGAGACATCTGCTTCATCTCTTTGGCCCTCTTTATGTCTGAGCCTAATGTTTAAAATGCAATTTTGTTTacatccattttatttattgttttggttgtgtCTGGCTTTTATTCCAGTGCATTTTTTGTtaacagagactgagagtccacgacaatattatcgtttatcgcaatgatttctgggacaatttatcgtccagcaaaatttgttaccGTGACAGGCCTACATAAAGCTGAAAACAGCCCTTTACGACGAtgaactgaagccgttatctctgttctctttaaagccaccagactcctttgacaaaaacagtaattttacctcgCGGAACACAGGACTTGCTGCTCTACCACTGCCTCCACGAGTTAGTTGGATTCACTTTGGTgaaccaaagtcacacaataacacaaactaactgaTCAAGGCAGTGCTAGACCAGCACCTCCAGTGAATCCTCTGATTTTGTAGCCAAGTTGGAACATTGAGTGGAGGGACTTCACGTAACGCCTTTTGTATTTACAACCAACttgaccgtgagtttgcagtgtgtttagcgattgttgctgtaattctaagccaataaagtgtgttcagtcaggtggagaggacggcaaggttgttgtgtttttagcggttcctac
>TU150692
CCCGGTTTCCTCGATGGCCACAGATTTGACGTAGCTGTCGTTGGAGTACAATACCACATTGGCGATCTGATCCACAGAGACAATGATGTTCTTGATGTTTTTGCTGGAGTTGTTTGTGACGCTGACGTTCACTTTGATGACCTCACCGTGGTAGTAAATCTCTTTGTCCAGACTGGCCTTGAGGTGCAGCTGTTTATCTGACATGACAAAGTCCTTGGGGGTATCAACAGAGGGCTGCACTCCCTCGCTGTCTGGAGCGTATTGGACCTTCCTGAGCAACAGCTTCACTGTGCTCCGTTTGCGTACCTTAGCGTCCTGGCTCTCAGCACTGAACGCTTTGATCTCAAACTCCACGGCACATTGCTTGCCGACATCATTGGGCCCTGGCTGGAGAGCCACTGAGCAAGGCAGGTTGTCAGGAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150690 False 321 lncRNA 0.49 4 4002014 4005335
TU150691 True 1092 lncRNA 0.44 2 4002014 4003733
TU150692 False 424 lncRNA 0.52 5 4007416 4010693

Neighbor

gene id symbol gene type direction distance location
LOC120568532 NA coding upstream 4155 3995617 ~ 3997859 (+)
LOC120568531 NA coding upstream 9425 3986445 ~ 3992589 (+)
dusp28 dusp28,LOC102795231 coding upstream 37961 3959592 ~ 3964053 (+)
vcpip1 vcpip1,LOC102795816 coding upstream 52448 3936631 ~ 3949566 (+)
LOC120568332 NA coding upstream 176580 3815820 ~ 3825434 (+)
crfb16 NA coding downstream 40627 4051320 ~ 4065021 (+)
cavin4a murc,LOC104936762,LOC101469804,LOC100705704,LOC101164252 coding downstream 326392 4337085 ~ 4349158 (+)
ift57 ift57,LOC102793808 coding downstream 366472 4377165 ~ 4393309 (+)
LOC120568271 NA coding downstream 405928 4416621 ~ 4418585 (+)
tmem71 NA coding downstream 448191 4458884 ~ 4474374 (+)
G111819 NA non-coding upstream 44740 3950944 ~ 3957274 (+)
G111789 NA non-coding upstream 160055 3791992 ~ 3841959 (+)
G111785 NA non-coding upstream 172155 3743977 ~ 3829859 (+)
G111792 NA non-coding upstream 201316 3799802 ~ 3800698 (+)
LOC120568336 LOC106921407,LOC102295145 non-coding upstream 203674 3795799 ~ 3798340 (+)
G111844 NA non-coding downstream 74409 4085102 ~ 4087986 (+)
G111851 LOC104960641,LOC102303545,LOC106675581,LOC102799398,LOC102203668 non-coding downstream 80334 4091027 ~ 4139026 (+)
G111847 NA non-coding downstream 80721 4091414 ~ 4139495 (+)
G111852 NA non-coding downstream 82146 4092839 ~ 4140904 (+)
G111853 NA non-coding downstream 82658 4093351 ~ 4141678 (+)
LOC120568521 NA other upstream 149980 3540987 ~ 3852034 (+)
LOC120568327 LOC102295145 other upstream 476899 3500679 ~ 3525115 (+)
LOC120568331 NA other upstream 495886 3491589 ~ 3506128 (+)
LOC120567769 LOC102296991,LOC102211951,LOC102799200,LOC101465856 other upstream 602831 3388054 ~ 3399183 (+)
G111494 NA other upstream 926113 3016958 ~ 3075901 (+)
G111848 NA other downstream 77951 4088644 ~ 4137543 (+)
G111850 LOC102799398 other downstream 79815 4090508 ~ 4138933 (+)
tmeff1a tmeff1,LOC102775778 other downstream 201431 4212124 ~ 4326186 (+)
dnaaf11 NA other downstream 488301 4498994 ~ 4592347 (+)
G111910 NA other downstream 534732 4545425 ~ 4546082 (+)

Expression


Co-expression Network