G111870


Basic Information

Item Value
gene id G111870
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4175530 ~ 4304787 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150744
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacagacacacacacactcagacacacacacacacacacacacactcagtcacacacacacacacacacacacactcagacacacacacacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150747
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacatacacacacacacagagacacacactcacacgtacacacacgcacacatacacacacgcacacaaacacacacacacacacaaacatacacatgcactgagctctcttaaaggagccgtagcaccattttacaaccaatgccttatcacgctgatgggaccgagc
>TU150749
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacactcagacacacacacacacacacactcagacacacacactcagacacacacacacacacacacacacacacacactcagacacacacacacactcagacacacacacacacacacacagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150750
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacagacacacacacactcagacacacacacagacacacacacacacacacacacactcagacacacacacacactcagacacacacacacacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150751
gctcgtgcacagcagcccgcacactatgcttgttacacacacagggacacacacacacacacacacacacacacacacagacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacacacacactcagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150752
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacactcagacacacacacacacacacactcagacacacacactcagacacacacacacacacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacacacacactcagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150753
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacactcagacacacacacacacacacactcagacacacacactcagacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacacacacactcagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150754
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacactcagacacacacacacacacacactcagacacacacacacacacagacacacacacactcagacacacacacacacacacacacactcagacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacacacacactcagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150755
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacactcagacacacacacacacacacactcagacacacacactcagacacacacacacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150756
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacacagacacacacacacacacacactcagacacacacacacacacacacacacacacacacacactcagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150757
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacagacacacacacacacacacactcagacacacacacacacacacacacacacacagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150758
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacacactcagacacacacacacactcagacacacacacacacacacacagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150759
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150760
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacactcagacacacacacacacacacactcagacacacacactcagacacacacacacacacacacacacacacactcagacacacacacacactcagacacacacacacacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac
>TU150762
catttatttatcctGCAGGCGATTGATTGAGCCGATATATATTTTCAAGCCGCGAGGTGATCCATAATTCAGTGCGGTGGCTGCATTTTAATACCGCGGCCGTCTCGTACATCATCTTTACTGCTTTCTCTTGGTATTCATTTCTGCAGCTTCTTTTTATTCAGCTCTGCTTCTGTTggggaaatacacacacagacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacacacactcagacacacacacactcagacacacacacacacacacactcagacacacacacagacacacacacactcagacacacacacacacacacacacactcagacacacacacacactcagacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacacacacactcagacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacactcagacacacacacacacacacacacacacacatacactcagacacacacacacactcagacacacacacacagacacacactcactcagacacacaatctcacacacactcagacacacacacacacacacacatacacactcacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150744 False 597 lncRNA 0.47 3 4237919 4238745
TU150747 False 503 lncRNA 0.47 3 4237919 4304787
TU150749 False 603 lncRNA 0.47 3 4237919 4238745
TU150750 False 451 lncRNA 0.47 4 4237919 4238745
TU150751 False 420 lncRNA 0.50 2 4175530 4238745
TU150752 False 707 lncRNA 0.48 2 4237919 4238745
TU150753 False 693 lncRNA 0.48 2 4237919 4238745
TU150754 True 741 lncRNA 0.48 3 4237919 4238745
TU150755 False 485 lncRNA 0.47 2 4237919 4238745
TU150756 False 601 lncRNA 0.47 2 4237919 4238745
TU150757 False 519 lncRNA 0.47 3 4237919 4238745
TU150758 False 531 lncRNA 0.47 3 4237919 4238745
TU150759 False 563 lncRNA 0.47 3 4237919 4238745
TU150760 False 497 lncRNA 0.47 4 4237919 4238745
TU150762 False 735 lncRNA 0.48 3 4237919 4238745

Neighbor

gene id symbol gene type direction distance location
crfb16 NA coding upstream 110509 4051320 ~ 4065021 (+)
LOC120568532 NA coding upstream 177671 3995617 ~ 3997859 (+)
LOC120568531 NA coding upstream 182941 3986445 ~ 3992589 (+)
dusp28 dusp28,LOC102795231 coding upstream 211477 3959592 ~ 3964053 (+)
vcpip1 vcpip1,LOC102795816 coding upstream 225964 3936631 ~ 3949566 (+)
cavin4a murc,LOC104936762,LOC101469804,LOC100705704,LOC101164252 coding downstream 32298 4337085 ~ 4349158 (+)
ift57 ift57,LOC102793808 coding downstream 72378 4377165 ~ 4393309 (+)
LOC120568271 NA coding downstream 111834 4416621 ~ 4418585 (+)
tmem71 NA coding downstream 154097 4458884 ~ 4474374 (+)
kcnq3 kcnq3 coding downstream 311246 4616033 ~ 4785371 (+)
G111856 NA non-coding upstream 27568 4098350 ~ 4147962 (+)
G111853 NA non-coding upstream 33852 4093351 ~ 4141678 (+)
G111852 NA non-coding upstream 34626 4092839 ~ 4140904 (+)
G111847 NA non-coding upstream 36035 4091414 ~ 4139495 (+)
G111851 LOC104960641,LOC102303545,LOC106675581,LOC102799398,LOC102203668 non-coding upstream 36504 4091027 ~ 4139026 (+)
G111891 NA non-coding downstream 127721 4432508 ~ 4433103 (+)
G111893 NA non-coding downstream 148026 4452813 ~ 4495891 (+)
G111897 LOC102195644,LOC102307680,LOC106675584 non-coding downstream 179847 4484634 ~ 4488017 (+)
G111904 NA non-coding downstream 210913 4515700 ~ 4516747 (+)
G111906 NA non-coding downstream 213462 4518249 ~ 4520189 (+)
G111850 LOC102799398 other upstream 36597 4090508 ~ 4138933 (+)
G111848 NA other upstream 37987 4088644 ~ 4137543 (+)
LOC120568521 NA other upstream 323496 3540987 ~ 3852034 (+)
LOC120568327 LOC102295145 other upstream 650415 3500679 ~ 3525115 (+)
LOC120568331 NA other upstream 669402 3491589 ~ 3506128 (+)
dnaaf11 NA other downstream 194207 4498994 ~ 4592347 (+)
G111910 NA other downstream 240638 4545425 ~ 4546082 (+)
LOC120568547 LOC106674584,LOC106676354,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 other downstream 1483436 5788223 ~ 5789417 (+)
epdr1 epdr1,LOC104965688 other downstream 1679070 5983857 ~ 5993711 (+)
LOC120568055 NA other downstream 1698898 6003685 ~ 6016600 (+)

Expression


Co-expression Network