G111935


Basic Information

Item Value
gene id G111935
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3495593 ~ 3692502 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150875
GGGACAACGGTCTGGACGGATGGACCGGCCGTGTCCTGCAGCGGCCTGGGTTGCTGATCTTCTCCCTCGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCCCATTGATGCGTGGtgacgtccctgGACTCGGCTATTCAAAGCCCCGCTGAAGCAGATATTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTCGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCCCTGGTTTTGAGGAGATTGTGATTTTAATGTCAGTTTAAACTtaacttttaaaatattaaaatggc
>TU150880
gtcaaactgtaacccagtttttcacCAAGAGAGGTGGGTAGCCTGTAGTCTGTGAGTGGTATTAACCTGTTGGCTTAATGTCCATAGTggaataagctagctagctacaggctagtgctagcctacatttaatcaccatttAATCAGTGCAGGGAAACGTTTAGCAAGATGTTCATATTAAATCATTGTCCCTGCCCCTTTTAGCAGCCTTAACAACAGATGAGTCAGCAGCAGCCCAGTCTCCCCCTAACTGAGCCCCTCCCTGTCCCAGTGAAGAAGtgacgtccctgGAATCGGCTATTCAAAGCCCCGCTGAAGCAGATATTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCCTGGTTTTTGAGGAGATTGTGATTTTAATGTCAG
>TU150882
GACGGATAGACCGGCTGTGTCCTGCAGCGGCCTGGCTTGCTGATCTTCTCCCTCGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCACACTGATGCGTGGTGACGTCCCTGGAATCGGCTATCCAAAGCCCCGCTGAAGCAGATCTTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCTCTGGTTTTTG
>TU150883
GGGACAACGGTCTGGACGGATGGACCGGCCGTGTCCTGCAGCGGCCTGGGTTGCTGATCTTCTCCCTCGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCCCATTGATGCGTGGCAGCCTTAACAACAGATGAGTCAGCAGCAGCCCAGTCTCCCCCTAACTGAGCCCCTCCCTGTCCCAGTGAAGAAGTGACGTCCCTGGAATCGGCTATCCAAAGCCCCGCTGAAGCAGATCTTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCTCTGGTTTTTG
>TU150885
CGTTCACATCAGCGATCTGATTGGCCAGCTGATCAGACCAGTCCCTATAAAAGGAGGCTAGATCGCTTACTGAGGGGGACAATGCTCTGGACGGATGGACCGGCTGTGTGCTGCAGCGGCCTGGCTTGCTGATCTTCTTCTCCCTCGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCACACTGATCCGTGGCAGCCTTAACAACAGATGAGTCAGCAGCAGCCCAGTCTCCCCCTAACTGAGCCCCTCCCTGTCCCAGTGAAGAAGTGACGTCCCTGGAATCGGCTATCCAAAGCCCCGCTGAAGCAGATCTTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCTCTGGTTTTTG
>TU150887
CGTTCACATCAGCGATCTGATTGGCCAGCTGATCAGACCAGTCCCTATAAAAGGAGGCTAGATCGCTTACTGAGGGGGACAATGCTCTGGACGGATGGACCGGCTGTGTGCTGCAGCGGCCTGGCTTGCTGATCTTCTTCTCCCTCGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCACACTGATCCGTGGTGACGTCCCTGGACTCGGCTATTCAAAGCCCCGCTGAAGCAGATATTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTTGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCCTGGTTTTTGAGGAGATTGTGATTTTAATGTCAGTTTAAACTtaacttttaaaatattaaaatggctgGG
>TU150888
GGGACAACGGTCTGGACGGATGGACCGGCCGTGTCCTGCAGCGGCCTGGGTTGCTGATCTTCTCCCTCGGTGTTGCTGCTGACTGGATCTCCTGTACCCTGGTGGAGCTGAATCCCAGACTCTGCAGTGAAGTGGTCCTTTTCTCCCCCATTGATGCGTGGCCTTAACAACAGATGAGTCAGCAGCAGCCCAGTCTCCCCCTAACTGAGCCCCTCCCTGTCCCAGTGAAGAAGtgacgtccctgGACTCGGCTATTCAAAGCCCCGCTGAAGCAGATATTCTGTGCCGGCGCCAGGAGAAACACGGAGCTGACTCCAGGCTGGACTGGACTTGGTTGTCGTTTCACCCTGGGACAGAATATTGGACAATCCATGGTTCTATTGTCTCCCCTGGTTTTGAGGAGATTGTGATTTTAAaagttaAGTTTAAACTGACATTAAAATCACAATCTCCTCAAAAACCAGGGGAGACAATAGAACCATGGATTGTCCAATATTCTGTCCCAGGGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150875 False 382 lncRNA 0.52 3 3592866 3618428
TU150880 False 468 lncRNA 0.48 3 3615146 3692502
TU150882 False 313 lncRNA 0.56 2 3495593 3596036
TU150883 False 402 lncRNA 0.57 3 3495593 3618428
TU150885 False 480 lncRNA 0.55 3 3495593 3521546
TU150887 False 464 lncRNA 0.51 2 3515803 3521546
TU150888 True 513 lncRNA 0.52 5 3571974 3618428

Neighbor

gene id symbol gene type direction distance location
LOC120568006 NA coding downstream 241224 3234368 ~ 3254369 (-)
LOC120568004 NA coding downstream 294740 3183582 ~ 3200853 (-)
LOC120568011 NA coding downstream 314288 3158202 ~ 3181305 (-)
LOC120568007 NA coding downstream 605854 2867255 ~ 2889739 (-)
LOC120568526 NA coding upstream 54795 3747297 ~ 3751140 (-)
LOC120568321 NA coding upstream 56955 3749457 ~ 3760667 (-)
LOC120568324 NA coding upstream 168827 3861329 ~ 3871815 (-)
LOC120568530 NA coding upstream 191254 3883756 ~ 3889916 (-)
proca NA coding upstream 279830 3972332 ~ 3983995 (-)
G111750 NA non-coding downstream 1324 3494028 ~ 3494269 (-)
G111745 NA non-coding downstream 8391 3486856 ~ 3487202 (-)
G111740 NA non-coding downstream 56478 3437912 ~ 3439115 (-)
G111716 NA non-coding downstream 96410 3398238 ~ 3399183 (-)
G111714 LOC102211951,LOC102296991,LOC102799200,LOC101465856 non-coding downstream 97628 3388130 ~ 3397965 (-)
LOC120568342 NA non-coding upstream 25764 3718266 ~ 3721122 (-)
LOC120568335 NA non-coding upstream 107693 3800195 ~ 3821190 (-)
G111997 NA non-coding upstream 275492 3967994 ~ 3969218 (-)
G112007 NA non-coding upstream 347382 4039884 ~ 4040197 (-)
LOC120567799 NA non-coding upstream 382227 4074729 ~ 4082082 (-)
LOC120569104 NA other downstream 39059 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 123818 3314646 ~ 3371775 (-)
LOC120568005 NA other downstream 266446 3204287 ~ 3229147 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other downstream 353139 2898215 ~ 3142454 (-)
G111573 NA other downstream 917579 2573304 ~ 2578014 (-)
G112043 NA other upstream 545600 4238102 ~ 4238670 (-)
G112046 NA other upstream 575036 4267538 ~ 4284083 (-)
G112233 NA other upstream 1971502 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 2031231 5723733 ~ 5746081 (-)
G112328 NA other upstream 2100661 5793163 ~ 5852447 (-)

Expression


Co-expression Network