G111938



Basic Information


Item Value
gene id G111938
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3499035 ~ 3519518 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU150896
CGCACCGTCTcgttgcattggtgtgaactagCAGCTTTCAGAGCGTTGCAGAGCGGAGCGTTGGGAGTAACTGGGGGATTCATCTCGTCGctactctttggtctgaactcgctATGCTTACCTTTTTAGCTAAGTTTTCTTGAGgtaaaggaaaggggatattttggtttgctatggaaaactaaagtctagctagagtgaacgaggg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU150896 True 208 lncRNA 0.47 2 3499035 3519518

Neighbor


gene id symbol gene type direction distance location
LOC120568006 NA coding downstream 244666 3234368 ~ 3254369 (-)
LOC120568004 NA coding downstream 298182 3183582 ~ 3200853 (-)
LOC120568011 NA coding downstream 317730 3158202 ~ 3181305 (-)
LOC120568007 NA coding downstream 609296 2867255 ~ 2889739 (-)
LOC120568323 NA coding upstream 152032 3671550 ~ 3706170 (-)
LOC120568526 NA coding upstream 227779 3747297 ~ 3751140 (-)
LOC120568321 NA coding upstream 229939 3749457 ~ 3760667 (-)
LOC120568324 NA coding upstream 341811 3861329 ~ 3871815 (-)
LOC120568530 NA coding upstream 364238 3883756 ~ 3889916 (-)
G111750 NA non-coding downstream 4766 3494028 ~ 3494269 (-)
G111745 NA non-coding downstream 11833 3486856 ~ 3487202 (-)
G111740 NA non-coding downstream 59920 3437912 ~ 3439115 (-)
G111716 NA non-coding downstream 99852 3398238 ~ 3399183 (-)
G111714 LOC102211951,LOC102296991,LOC102799200,LOC101465856 non-coding downstream 101070 3388130 ~ 3397965 (-)
LOC120568338 NA non-coding upstream 25135 3544653 ~ 3547804 (-)
LOC120568334 NA non-coding upstream 95661 3615179 ~ 3618414 (-)
G111946 NA non-coding upstream 140258 3659776 ~ 3724882 (-)
G111960 NA non-coding upstream 155979 3675497 ~ 3701800 (-)
G111961 LOC102295145 non-coding upstream 163786 3683304 ~ 3683612 (-)
LOC120569104 NA other downstream 42501 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 127260 3314646 ~ 3371775 (-)
LOC120568005 NA other downstream 269888 3204287 ~ 3229147 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other downstream 356581 2898215 ~ 3142454 (-)
G111573 NA other downstream 921021 2573304 ~ 2578014 (-)
LOC120568522 NA other upstream 45028 3564546 ~ 3585526 (-)
LOC120568325 NA other upstream 110047 3629565 ~ 3633399 (-)
G112043 NA other upstream 718584 4238102 ~ 4238670 (-)
G112046 NA other upstream 748020 4267538 ~ 4284083 (-)
G112233 NA other upstream 2144486 5664004 ~ 5668687 (-)

Expression



Co-expression Network