G111942


Basic Information

Item Value
gene id G111942
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3504498 ~ 4036963 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150904
GTGCATTAGTCCATGTTTGTCTTTAGTCCCCATATAACCCGTGCTGACATGAGATGATGTGTGTGTTCCATATGAAGGTGAATCCAGTATATGTAGTGAACTTTGTGCTGTATTGATGAGTAGTTTAGTGATCAGAGTCCATGTAGTTTCCAGGATCAGACTGAATGCAGTGCTGGAAGCTGCTGgtgactgtgtgaatgtgtgtctgtgctgcttgTTGCTGCTGTCAAACTTCAGATGAGCCGGTAGTGAAGCCCGTGGTGAGCGTGTACCCAGCAGCATCCAGAGCCCACCTGGAGGGGAAGAGCTCCCTGCTGTGTCTGGCCTCAGCCATGTTTCCTCCTCTGGTCCAGTTCTCCTGGAAAAGACGAAATGAGAATGGTCCTCTGGAGGAGCTGCCCTCTGATGAGGGAGAGCAGCTGGAGATCAGAGAGTCAGGACACACCGCCTCCATCTTGCTGATCCATCAGCAAGAGAACAGCACATATAAATACCGCTGTGATGTCCTACATGAGGGGGGGACAGTGGAGGCCCAAACAGAACAAGaGGTTCCAGCTCCAGCAGCCTCCTGTCCTCCAGAGAGAGATCCACCAGACCAGCTAGCTCTGGAGGAAGCTGACTtgtcctTCCAGTCCCAGTGCAGGGTGAAGTTGTTCTGTCTGCTGTACACACAGCTGATAGTGAAGAGTCTGGTGTACTGCTGTGGACTTTCTCTGCTGATGATCCTCAGAAACAAGGGAC
>TU150906
ACATCACAGCGGTATTTATATGTGCTGTTCTCTTTCTGATGGATCAGCAAGATGGAGGCGGTGTGTCCTGACTCTCTGATCTCCAGCTGCTCTATATCATCAGAGGACAGCTCCTCCAGAGGACCAGTCTCCTTTCGTCTTTTCCAGGAGAACTGGACCAGAGGAGGAAACATGGCTGAGGCCAGACACAGCAGGGAGCTCTTCCCCTCCAGGTGGGCTCTGGATGCTGCTGGGTACACGCTCACCACGGGCTTCACTACCGGCTCATCTGAAGTTTGACAGCAGCAAcaagcagcacagacacacattcacacagtcacCAGCAGCTTCCAGCACTGCATTCAGTCTGATCCTGGAAACTACATGGACTCTGATCACTAAACTACTCATCAATACAGCACAAAGTTCACTACATCTACTGGATTCACCttcatatgaaacacacagtcacCAGCAGCTTCCAGCACTGCATTCAGTCTGATCCTGGAAACTACATGGACTCTGATCACTAAACTACTCATCAATACAGCACAAAGTTCACTACATATACTGGATTCACCTTCATATGGAACACACACATCATCTCATGTCAGCACGGGTTATATGGGGACTAAAGACAGTTATGGACTAATGTACAAAGTCTATTCactataattattattactaaCATAACATAATGATGACATTTTCCTTCATAAAATGGACAATTTCTTTCT

Function

GO:

id name namespace
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150904 True 741 TUCP 0.51 3 4035542 4036963
TU150906 False 716 lncRNA 0.45 3 3504498 3551007

Neighbor

gene id symbol gene type direction distance location
LOC120568006 NA coding downstream 250129 3234368 ~ 3254369 (-)
LOC120568004 NA coding downstream 303645 3183582 ~ 3200853 (-)
LOC120568011 NA coding downstream 323193 3158202 ~ 3181305 (-)
LOC120568007 NA coding downstream 614759 2867255 ~ 2889739 (-)
si:ch73-170d6.2 NA coding upstream 73783 4110746 ~ 4121351 (-)
slc39a6 slc39a6 coding upstream 108900 4145863 ~ 4168656 (-)
LOC120567835 LOC106949703,LOC103156008,LOC107087008 coding upstream 450365 4487328 ~ 4499789 (-)
LOC120567837 NA coding upstream 468759 4505722 ~ 4510614 (-)
si:dkey-7l6.3 NA coding upstream 482398 4519361 ~ 4527181 (-)
G111750 NA non-coding downstream 10229 3494028 ~ 3494269 (-)
G111745 NA non-coding downstream 17296 3486856 ~ 3487202 (-)
G111740 NA non-coding downstream 65383 3437912 ~ 3439115 (-)
G111716 NA non-coding downstream 105315 3398238 ~ 3399183 (-)
G111714 LOC102211951,LOC102296991,LOC102799200,LOC101465856 non-coding downstream 106533 3388130 ~ 3397965 (-)
G112007 NA non-coding upstream 2921 4039884 ~ 4040197 (-)
LOC120567799 NA non-coding upstream 37766 4074729 ~ 4082082 (-)
G112018 LOC102799398 non-coding upstream 53545 4090508 ~ 4138931 (-)
G112019 NA non-coding upstream 55602 4092565 ~ 4140920 (-)
G112009 NA non-coding upstream 63211 4100174 ~ 4100868 (-)
LOC120569104 NA other downstream 47964 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 132723 3314646 ~ 3371775 (-)
LOC120568005 NA other downstream 275351 3204287 ~ 3229147 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other downstream 362044 2898215 ~ 3142454 (-)
G111573 NA other downstream 926484 2573304 ~ 2578014 (-)
G112043 NA other upstream 201139 4238102 ~ 4238670 (-)
G112046 NA other upstream 230575 4267538 ~ 4284083 (-)
G112233 NA other upstream 1627041 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 1686770 5723733 ~ 5746081 (-)
G112328 NA other upstream 1756200 5793163 ~ 5852447 (-)

Expression


Co-expression Network